RNA–Protein interactions for RNA: ENST00000515838.2

RBM4-209, Transcript of RNA binding motif protein 4, human

TSL 2

Gene RBM4, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-209	ENST00000515838		S4R3C0	116 aa		11.21	□□□□□ -0.61
RBM4-209	ENST00000515838	RBMY1B	A6NDE4	496 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	RBMY1E	A6NEQ0	496 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	EIF4E	P06730	217 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	RBMY1D	P0C7P1	496 aa	Known RBP	11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	RPA2	P15927	270 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	TBP	P20226	339 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	HLA-DMA	P28067	261 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	RORC	P51449	518 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	VBP1	P61758	197 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	ZNF585B	Q52M93	769 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	LAMTOR1	Q6IAA8	161 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	MZT2A	Q6P582	158 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	BTNL8	Q6UX41	500 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	UNQ9165/PRO28630	Q6UXU0	137 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	OR1P1	Q8NH06	330 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	ZNF486	Q96H40	463 aa	Predicted RBP	11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	FAM110A	Q9BQ89	295 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	GGTLC1	Q9BX51	225 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	C21orf62	Q9NYP8	219 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838	RYR2	Q92736	4967 aa		11.2	□□□□□ -0.62
RBM4-209	ENST00000515838		K7EMT4	169 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	TSPAN4	O14817	238 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	FCGR2B	P31994	310 aa	Predicted RBP	11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	G6PC	P35575	357 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	NCS1	P62166	190 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	TM4SF20	Q53R12	229 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	OR2C3	Q8N628	320 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	ZNF114	Q8NC26	417 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	TXN2	Q99757	166 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	BCL7B	Q9BQE9	202 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	HINT2	Q9BX68	163 aa		11.19	□□□□□ -0.62
RBM4-209	ENST00000515838	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	OR2T8	A6NH00	312 aa		11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	C15orf62	A8K5M9	175 aa		11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	ATG12	O94817	140 aa		11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	ZNF182	P17025	639 aa	Predicted RBP	11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	REL	Q04864	619 aa	Predicted RBP	11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	ZFAND6	Q6FIF0	208 aa		11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	H2BFWT	Q7Z2G1	175 aa		11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	TBC1D26	Q86UD7	250 aa		11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	ARRDC1	Q8N5I2	433 aa		11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	OR4A16	Q8NH70	328 aa		11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	SCARB1	Q8WTV0	552 aa		11.18	□□□□□ -0.62
RBM4-209	ENST00000515838	JTB	O76095	146 aa		11.17	□□□□□ -0.62
RBM4-209	ENST00000515838	SCAF4	O95104	1147 aa	Known RBP	11.17	□□□□□ -0.62
RBM4-209	ENST00000515838	EDN2	P20800	178 aa		11.17	□□□□□ -0.62
RBM4-209	ENST00000515838	APOC4	P55056	127 aa		11.17	□□□□□ -0.62
RBM4-209	ENST00000515838	RND3	P61587	244 aa		11.17	□□□□□ -0.62
RBM4-209	ENST00000515838	PHLDA2	Q53GA4	152 aa		11.17	□□□□□ -0.62
RBM4-209	ENST00000515838	SNX29P2	Q8IUI4	249 aa		11.17	□□□□□ -0.62
RBM4-209	ENST00000515838	SEC22A	Q96IW7	307 aa		11.17	□□□□□ -0.62
RBM4-209	ENST00000515838	TP53TG1	Q9Y2A0	90 aa		11.17	□□□□□ -0.62
RBM4-209	ENST00000515838	OR4C46	A6NHA9	309 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838		K7EIM0	57 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	UBE2C	O00762	179 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	NUPL2	O15504	423 aa	Known RBP	11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	B3GALNT1	O75752	331 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	CD5	P06127	495 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	ELK1	P19419	428 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	BMI1	P35226	326 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	CMC4	P56277	68 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	PRCD	Q00LT1	54 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	RNASE10	Q5GAN6	216 aa	Known RBP	11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	WFDC10A	Q9H1F0	79 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	NSG2	Q9Y328	171 aa		11.16	□□□□□ -0.62
RBM4-209	ENST00000515838	KIR2DL5B	A0A0G2JN68	375 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	KIR2DL5B	A0A0G2JPC4	375 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	HPGDS	O60760	199 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	MFAP2	P55001	183 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	MFAP4	P55083	255 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	HSPE1	P61604	102 aa	Known RBP	11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	ERH	P84090	104 aa	Known RBP	11.15	□□□□□ -0.62
RBM4-209	ENST00000515838		Q56UQ5	140 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838		Q6ZWC4	215 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	KIR2DL5A	Q8N109	375 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	KIR2DL5B	Q8NHK3	375 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	RETN	Q9HD89	108 aa		11.15	□□□□□ -0.62
RBM4-209	ENST00000515838	IGHV3-35	A0A0C4DH35	117 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	FAM25A	B3EWG3	89 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	FAM25C	B3EWG5	89 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	FAM25G	B3EWG6	89 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838		F8W735	103 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	INS-IGF2	F8WCM5	200 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	CTSG	P08311	255 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	MRPS10	P82664	201 aa	Known RBP	11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	SSBP1	Q04837	148 aa	Known RBP	11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	WFDC3	Q8IUB2	231 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	UBAC2	Q8NBM4	344 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	DYNC2LI1	Q8TCX1	351 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	CHRDL1	Q9BU40	450 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	C20orf24	Q9BUV8	137 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	MTFP1	Q9UDX5	166 aa		11.14	□□□□□ -0.63
RBM4-209	ENST00000515838	DNAH1	Q9P2D7	4330 aa		11.13	□□□□□ -0.63
RBM4-209	ENST00000515838	CORT	O00230	105 aa		11.13	□□□□□ -0.63
RBM4-209	ENST00000515838	ATF4	P18848	351 aa	Predicted RBP	11.13	□□□□□ -0.63
RBM4-209	ENST00000515838	ADM	P35318	185 aa		11.13	□□□□□ -0.63
RBM4-209	ENST00000515838	LHFPL1	Q86WI0	220 aa		11.13	□□□□□ -0.63
RBM4-209	ENST00000515838	CCDC71L	Q8N9Z2	235 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms