RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 SCGB1C1Q8TD33 95 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 MBD6Q96DN6 1003 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 C1orf159Q96HA4 380 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 UQCC1Q9NVA1 299 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 TRAV20A0A0B4J274 112 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 SMCO3A2RU48 225 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 CNIH1O95406 144 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 IGHV3-48P01763 117 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 RNASE2P10153 161 aaKnown RBP7.29□□□□□ -1.24
CPNE4-213ENST00000515418 RPL27AP46776 148 aaKnown RBP7.29□□□□□ -1.24
CPNE4-213ENST00000515418 COMPP49747 757 aaPredicted RBP7.29□□□□□ -1.24
CPNE4-213ENST00000515418 RAB11AP62491 216 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 ERHP84090 104 aaKnown RBP7.29□□□□□ -1.24
CPNE4-213ENST00000515418 TMEM249Q2WGJ8 235 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 NPBQ8NG41 125 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 C22orf15Q8WYQ4 148 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 TAF15Q92804 592 aaKnown RBP eCLIP7.29□□□□□ -1.24
CPNE4-213ENST00000515418 PINX1Q96BK5 328 aaKnown RBP7.29□□□□□ -1.24
CPNE4-213ENST00000515418 FAM103A1Q9BTL3 118 aaKnown RBP7.29□□□□□ -1.24
CPNE4-213ENST00000515418 WDR61Q9GZS3 305 aaKnown RBP7.29□□□□□ -1.24
CPNE4-213ENST00000515418 VSIRQ9H7M9 311 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 ITGB1BP2Q9UKP3 347 aa7.29□□□□□ -1.24
CPNE4-213ENST00000515418 IGLC7A0M8Q6 106 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 PRH1P02810 166 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 FAM106CPP0CH98 169 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 IGHV4-31P0DP07 118 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 EBI3Q14213 229 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 ATP6V1FQ16864 119 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 C5orf64Q2M2E5 130 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 BSXQ3C1V8 233 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 ARSJQ5FYB0 599 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-213ENST00000515418 PXDC1Q5TGL8 231 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 Q8N6K4 173 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 P2RX4Q99571 388 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 TMEM147Q9BVK8 224 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 HRH4Q9H3N8 390 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 KIAA1456Q9P272 454 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 A0A1B0GV50 99 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 SH2D7A6NKC9 451 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-213ENST00000515418 TEX22C9J3V5 150 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 EIF3GO75821 320 aaKnown RBP eCLIP7.28□□□□□ -1.24
CPNE4-213ENST00000515418 NDUFA3O95167 84 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 LY86O95711 162 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 FGF7P21781 194 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 BRS3P32247 399 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 C2orf83Q53S99 150 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 Q6ZRG5 221 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 TMEM219Q86XT9 240 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 PIFOQ8TCI5 191 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 SSMEM1Q8WWF3 244 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 SRSF12Q8WXF0 261 aaKnown RBP7.28□□□□□ -1.24
CPNE4-213ENST00000515418 GNPNAT1Q96EK6 184 aaPredicted RBP7.28□□□□□ -1.24
CPNE4-213ENST00000515418 FAM96BQ9Y3D0 163 aa7.28□□□□□ -1.24
CPNE4-213ENST00000515418 A0A1W2PN81 502 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 SMAD7O15105 426 aaKnown RBP7.27□□□□□ -1.25
CPNE4-213ENST00000515418 AGPAT2O15120 278 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 MDKP21741 143 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-213ENST00000515418 MAS1LP35410 378 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 CHRNA7P36544 502 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 MFAP2P55001 183 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 CX3CL1P78423 397 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 ZNF616Q08AN1 781 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 FXYD3Q14802 87 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 VWC2Q2TAL6 325 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 PRSS57Q6UWY2 283 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 BTNL8Q6UX41 500 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 TREML4Q6UXN2 200 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 BCL6BQ8N143 479 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-213ENST00000515418 OR2T6Q8NHC8 308 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 FAM213BQ8TBF2 198 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 SSX3Q99909 188 aa7.27□□□□□ -1.25
CPNE4-213ENST00000515418 FLNBO75369 2602 aaKnown RBP7.27□□□□□ -1.25
CPNE4-213ENST00000515418 IGHV3-21A0A0B4J1V1 117 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 MDFIC2A0A1B0GVS7 189 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 GATA3P23771 443 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 CAMLGP49069 296 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 ELLP55199 621 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-213ENST00000515418 Q8N9W7 124 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 SAT2Q96F10 170 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-213ENST00000515418 NPCDR1Q9BY65 106 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 PFDN2Q9UHV9 154 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 MFSD2BA6NFX1 497 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 LINC01548A6NM66 108 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 INS-IGF2F8WCM5 200 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 DLK1P80370 383 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 NDPQ00604 133 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 GAMTQ14353 236 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 LY6EQ16553 131 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 AKR1C8PQ5T2L2 129 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 ZNF562Q6V9R5 426 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 LRRC20Q8TCA0 184 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 ABHD5Q8WTS1 349 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 PARD6GQ9BYG4 376 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-213ENST00000515418 MEGF9Q9H1U4 602 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 FNDC4Q9H6D8 234 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-213ENST00000515418 RPRMQ9NS64 109 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 MRPL36Q9P0J6 103 aaKnown RBP7.26□□□□□ -1.25
CPNE4-213ENST00000515418 WDR83OSQ9Y284 106 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 DMRT1Q9Y5R6 373 aa7.26□□□□□ -1.25
CPNE4-213ENST00000515418 IGKV1OR2-108A0A075B7D4 117 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms