RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 MAGT1Q9H0U3 335 aa16.42■□□□□ 0.22
LSM6-207ENST00000515311 ZFP57Q9NU63 452 aa16.42■□□□□ 0.22
LSM6-207ENST00000515311 WRBO00258 174 aa16.41■□□□□ 0.22
LSM6-207ENST00000515311 PSMB8P28062 276 aa16.41■□□□□ 0.22
LSM6-207ENST00000515311 POLR2GP62487 172 aaKnown RBP eCLIP16.41■□□□□ 0.22
LSM6-207ENST00000515311 KLK9Q2XQG4 91 aa16.41■□□□□ 0.22
LSM6-207ENST00000515311 BSXQ3C1V8 233 aa16.41■□□□□ 0.22
LSM6-207ENST00000515311 AWAT1Q58HT5 328 aa16.41■□□□□ 0.22
LSM6-207ENST00000515311 RNF152Q8N8N0 203 aa16.41■□□□□ 0.22
LSM6-207ENST00000515311 OR5AU1Q8NGC0 362 aa16.41■□□□□ 0.22
LSM6-207ENST00000515311 OR1L6Q8NGR2 347 aa16.41■□□□□ 0.22
LSM6-207ENST00000515311 ZNF436Q9C0F3 470 aaPredicted RBP16.41■□□□□ 0.22
LSM6-207ENST00000515311 KLK9Q9UKQ9 250 aa16.41■□□□□ 0.22
LSM6-207ENST00000515311 CYB5BO43169 146 aa16.4■□□□□ 0.22
LSM6-207ENST00000515311 ELANEP08246 267 aa16.4■□□□□ 0.22
LSM6-207ENST00000515311 SNCAP37840 140 aa16.4■□□□□ 0.22
LSM6-207ENST00000515311 HTR2BP41595 481 aa16.4■□□□□ 0.22
LSM6-207ENST00000515311 C10orf99Q6UWK7 81 aa16.4■□□□□ 0.22
LSM6-207ENST00000515311 OR1P1Q8NH06 330 aa16.4■□□□□ 0.22
LSM6-207ENST00000515311 RAB40CQ96S21 281 aa16.4■□□□□ 0.22
LSM6-207ENST00000515311 SLA2Q9H6Q3 261 aa16.4■□□□□ 0.22
LSM6-207ENST00000515311 RCL1Q9Y2P8 373 aaKnown RBP16.4■□□□□ 0.22
LSM6-207ENST00000515311 F11RQ9Y624 299 aaKnown RBP16.4■□□□□ 0.22
LSM6-207ENST00000515311 K7EPK0 472 aa16.39■□□□□ 0.21
LSM6-207ENST00000515311 SSSCA1O60232 199 aa16.39■□□□□ 0.21
LSM6-207ENST00000515311 GIPP09681 153 aaPredicted RBP16.39■□□□□ 0.21
LSM6-207ENST00000515311 DEFA4P12838 97 aa16.39■□□□□ 0.21
LSM6-207ENST00000515311 SUB1P53999 127 aaKnown RBP eCLIP16.39■□□□□ 0.214e-6■■■□□ 17.5
LSM6-207ENST00000515311 ATP5IP56385 69 aaPredicted RBP16.39■□□□□ 0.21
LSM6-207ENST00000515311 OR4X2Q8NGF9 303 aa16.39■□□□□ 0.21
LSM6-207ENST00000515311 WFDC12Q8WWY7 111 aa16.39■□□□□ 0.21
LSM6-207ENST00000515311 P2RX4Q99571 388 aa16.39■□□□□ 0.21
LSM6-207ENST00000515311 TENM1Q9UKZ4 2725 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 RNASE2P10153 161 aaKnown RBP16.38■□□□□ 0.21
LSM6-207ENST00000515311 PF4V1P10720 104 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 HIST1H1BP16401 226 aaKnown RBP16.38■□□□□ 0.21
LSM6-207ENST00000515311 TAS2R30P59541 319 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 S100A10P60903 97 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 RAB32Q13637 225 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 PVRIGQ6DKI7 326 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 SLC24A4Q8NFF2 622 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 PPP1R1CQ8WVI7 109 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 SMIM8Q96KF7 97 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 U3KQ87 197 aa16.38■□□□□ 0.21
LSM6-207ENST00000515311 IGLV11-55A0A075B6I3 123 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 TRBV9A0A0B4J1U6 114 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 IAPPP10997 89 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 RAP2BP61225 183 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 C11orf87Q6NUJ2 197 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 TMEM65Q6PI78 240 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 C19orf35Q6ZS72 473 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 NOXA1Q86UR1 476 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 CHAC2Q8WUX2 184 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 WDR89Q96FK6 387 aaPredicted RBP16.37■□□□□ 0.21
LSM6-207ENST00000515311 FANCD2OSQ96PS1 177 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 ZNF355PQ9NSJ1 428 aa16.37■□□□□ 0.21
LSM6-207ENST00000515311 LSM5Q9Y4Y9 91 aaKnown RBP16.37■□□□□ 0.21
LSM6-207ENST00000515311 COL6A5A8TX70 2615 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 PRH1P02810 166 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 PET100P0DJ07 73 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 PVALBP20472 110 aaPredicted RBP16.36■□□□□ 0.21
LSM6-207ENST00000515311 NPY1RP25929 384 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 RAB9AP51151 201 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 RPP30P78346 268 aaKnown RBP16.36■□□□□ 0.21
LSM6-207ENST00000515311 C2orf83Q53S99 150 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 TCTEX1D4Q5JR98 221 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 NECAP1Q8NC96 275 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 MYOZ3Q8TDC0 251 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 KLK15Q9H2R5 256 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 DMRT1Q9Y5R6 373 aa16.36■□□□□ 0.21
LSM6-207ENST00000515311 hCG_2014768A0A024R1R8 64 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 A0A1B0GVG6 124 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 FAM223BA6NKX1 122 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 TSC22D2O75157 780 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 DEDDO75618 318 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 TMEM50AO95807 157 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 IFNA10P01566 189 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 TRGV3P03979 118 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 MFAP2P55001 183 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 PAX9P55771 341 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 TPPP2P59282 170 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 LRRC37A5PQ49AS3 106 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 FAM223AQ8IWN6 122 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 MS4A10Q96PG2 267 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 C11orf1Q9H5F2 150 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 THYN1Q9P016 225 aa16.35■□□□□ 0.21
LSM6-207ENST00000515311 L7N2F9 121 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 CORTO00230 105 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 MPC2O95563 127 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 RLN2P04090 185 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 BCAP31P51572 246 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 VAMP2P63027 116 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 RHOGP84095 191 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 SLC25A24Q6NUK1 477 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 TMEM170AQ8WVE7 144 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 PSENENQ9NZ42 101 aa16.34■□□□□ 0.21
LSM6-207ENST00000515311 RPLP1P05386 114 aaKnown RBP16.33■□□□□ 0.2
LSM6-207ENST00000515311 CD28P10747 220 aa16.33■□□□□ 0.2
LSM6-207ENST00000515311 KRTAP10-3P60369 221 aa16.33■□□□□ 0.2
LSM6-207ENST00000515311 RPL23AP62750 156 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms