RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ZNF841Q6ZN19 808 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 Q96M66 194 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 VWC2LB2RUY7 222 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 C3orf79P0CE67 100 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNF32P17041 273 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 BLVRBP30043 206 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 VDAC2P45880 294 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 FUT6P51993 359 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 LINC00310P59036 64 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 YPEL3P61236 119 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 PSG4Q00888 419 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 FOXE3Q13461 319 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 MBNL2Q5VZF2 373 aaKnown RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 DHRS13Q6UX07 377 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 C6orf201Q7Z4U5 140 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 FAM19A5Q7Z5A7 132 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 ZDHHC23Q8IYP9 409 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 SPTSSAQ969W0 71 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 WDYHV1Q96HA8 205 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 HDHD3Q9BSH5 251 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 C1orf43Q9BWL3 253 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 GGTLC1Q9BX51 225 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 TM2D2Q9BX73 214 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 TMEM126AQ9H061 195 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 SIRPDQ9H106 197 aa6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 SPANXB1Q9NS25 103 aaPredicted RBP6.23□□□□□ -1.41
PDLIM5-219ENST00000514743 URB1O60287 2271 aaKnown RBP6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 LOC107984640A0A0U1RRK4 108 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 MBD3L4A6NDZ8 208 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 MBD3L3A6NE82 208 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 MBD3L5A6NJ08 208 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 C17orf112F2Z3M2 114 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNHIT1O43257 154 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 SYNGR1O43759 233 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 FABP2P12104 132 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 PSG7Q13046 419 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 DAZAP2Q15038 168 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 OR5H2Q8NGV7 314 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 OR1F12Q8NHA8 337 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 SPIN2AQ99865 258 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 SPIN2BQ9BPZ2 258 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 LIME1Q9H400 295 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 EHFQ9NZC4 300 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 TP53TG3Q9ULZ0 132 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 PXMP4Q9Y6I8 212 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 KIR2DS1A0A191URI9 304 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 NHLRC4P0CG21 123 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 IL3RAP26951 378 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 KIR2DS1Q14954 304 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 MEIG1Q5JSS6 88 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 SLC25A34Q6PIV7 304 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 Q6ZUT4 128 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 ZFP62Q8NB50 900 aaPredicted RBP6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 BORCS7Q96B45 105 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 FOXB1Q99853 325 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 SIGLEC9Q9Y336 463 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 CFAP47Q6ZTR5 3102 aa6.22□□□□□ -1.41
PDLIM5-219ENST00000514743 IGKV1-12A0A0C4DH73 117 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 ANGPTL7O43827 346 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 NEURL1O76050 574 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 IGKV1D-12P01611 117 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 GPX1P07203 203 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 ZNF883P0CG24 379 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 CT45A6P0DMU7 189 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 CT45A5P0DMU8 189 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 CT45A7P0DMV0 189 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 RPL15P61313 204 aaKnown RBP6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 SEC11AP67812 179 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 IL15RAQ13261 267 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 PDCD1Q15116 288 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 CT45A1Q5HYN5 189 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 SPINK14Q6IE38 97 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 LCN12Q6JVE5 192 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 Q6ZPA2 131 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 SGPP2Q8IWX5 399 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 DEFB123Q8N688 67 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 CT45A3Q8NHU0 189 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 EMG1Q92979 244 aaKnown RBP6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 OR2H1Q9GZK4 316 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 SPANXA1Q9NS26 97 aa6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 SOX21Q9Y651 276 aaPredicted RBP6.21□□□□□ -1.41
PDLIM5-219ENST00000514743 ZDBF2Q9HCK1 2354 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 hADV38S2A0JD32 116 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 H3BRM9 83 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 APOA2P02652 100 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 ORM1P02763 201 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 FOXG1P55316 489 aaPredicted RBP6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 RTP5Q14D33 572 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 CEACAM16Q2WEN9 425 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 AAED1Q7RTV5 226 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 OR1L8Q8NGR8 309 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 CLDND2Q8NHS1 167 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 RBMXL1Q96E39 390 aaKnown RBP6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 C20orf78Q9BR46 151 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 GNG13Q9P2W3 67 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 TRBV20-1A0A075B6N2 111 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 TIMM8AO60220 97 aaPredicted RBP6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 FCN3O75636 299 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 CGAP01215 116 aa6.21□□□□□ -1.42
PDLIM5-219ENST00000514743 VDAC1P21796 283 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms