RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SRD5A3Q9H8P0 318 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 FKBP11Q9NYL4 201 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 EXTL2Q9UBQ6 330 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 KLK11Q9UBX7 282 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 UFC1Q9Y3C8 167 aa7.85□□□□□ -1.15
HMGXB3-205ENST00000514469 IGHV3-35A0A0C4DH35 117 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 RBMY1BA6NDE4 496 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 RBMY1EA6NEQ0 496 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 OR11H12B2RN74 326 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 CD3DP04234 171 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 RBMY1DP0C7P1 496 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 ALDH3B2P48448 385 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 RNASE10Q5GAN6 216 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 GPR107Q5VW38 600 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 SLC25A24Q6NUK1 477 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 SPSB3Q6PJ21 355 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 SLC16A13Q7RTY0 426 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 ZNF114Q8NC26 417 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 OR1L6Q8NGR2 347 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 OR1P1Q8NH06 330 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 OR52I2Q8NH67 350 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 SCARB1Q8WTV0 552 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 MRGPRFQ96AM1 343 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 RETNQ9HD89 108 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 C21orf62Q9NYP8 219 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 MRPL27Q9P0M9 148 aaKnown RBP7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 MTFP1Q9UDX5 166 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 SELENOKQ9Y6D0 94 aa7.84□□□□□ -1.15
HMGXB3-205ENST00000514469 IGHV3-21A0A0B4J1V1 117 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 TRAV25A0A0B4J276 109 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 NDUFA4O00483 81 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 SCAF4O95104 1147 aaKnown RBP7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 CD74P04233 296 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 IFNA6P05013 189 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 ADMP35318 185 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 PRCDQ00LT1 54 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 H2BFWTQ7Z2G1 175 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 OR2C3Q8N628 320 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 OR4A16Q8NH70 328 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 C15orf40Q8WUR7 153 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 ZNF414Q96IQ9 312 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 ABHD1Q96SE0 405 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 CHRDL1Q9BU40 450 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 MIXL1Q9H2W2 232 aa7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 DAZ1Q9NQZ3 744 aaKnown RBP7.83□□□□□ -1.16
HMGXB3-205ENST00000514469 DNAH1Q9P2D7 4330 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 IGKV1-5P01602 117 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 P0C879 139 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 PGAM2P15259 253 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 PI3P19957 117 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 FCGR2BP31994 310 aaPredicted RBP7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 PPP5CP53041 499 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 PIGPP57054 158 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 SPCS2Q15005 226 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 ANKRD55Q3KP44 614 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 GPR141Q7Z602 305 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 TMEM229BQ8NBD8 167 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 OR4D10Q8NGI6 311 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 OR52B4Q8NGK2 314 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 TP53RKQ96S44 253 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 C5orf66Q9H5L9 145 aa7.82□□□□□ -1.16
HMGXB3-205ENST00000514469 GABARAPH6UMI1 98 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 I3L2K1 104 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 TSPAN4O14817 238 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 CTSGP08311 255 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 TAS2R19P59542 299 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 HSPE1P61604 102 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 SSBP1Q04837 148 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 IZUMO4Q1ZYL8 232 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 Q56UQ5 140 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 ZFAND6Q6FIF0 208 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 RBPMS2Q6ZRY4 209 aaKnown RBP7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 UBAC2Q8NBM4 344 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 SPAG8Q99932 426 aaPredicted RBP7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 FAM110AQ9BQ89 295 aa7.81□□□□□ -1.16
HMGXB3-205ENST00000514469 C3orf85A0A1B0GTC6 90 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 C15orf62A8K5M9 175 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 INS-IGF2F8WCM5 200 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 K7EMT4 169 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 RGS5O15539 181 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 MRPS10P82664 201 aaKnown RBP7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 RELQ04864 619 aaPredicted RBP7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 STEAP1BQ6NZ63 245 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 OR13C8Q8NGS7 320 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 TERB2Q8NHR7 220 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 ZFAND1Q8TCF1 268 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 SMIM4Q8WVI0 70 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 MISP3Q96FF7 219 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 TXN2Q99757 166 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 GGTLC1Q9BX51 225 aa7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 GAR1Q9NY12 217 aaKnown RBP7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 CCDC59Q9P031 241 aaKnown RBP7.8□□□□□ -1.16
HMGXB3-205ENST00000514469 TENM2Q9NT68 2774 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 IGHV3OR16-8A0A075B7F1 116 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 LOC102724200A0A096LPH7 203 aaPredicted RBP7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 A0A0B4J293 547 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 LCE6AA0A183 80 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 CTDSP2O14595 271 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 B3GALNT1O75752 331 aa7.79□□□□□ -1.16
HMGXB3-205ENST00000514469 ATG12O94817 140 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms