RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 HEATR1Q9H583 2144 aaKnown RBP-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 PEAK1Q9H792 1746 aa-0.1□□□□□ -2.43
PDGFC-208ENST00000512711 DNAH1Q9P2D7 4330 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 FLGP20930 4061 aaPredicted RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 CHD6Q8TD26 2715 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 TET1Q8NFU7 2136 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 KNTC1P50748 2209 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 USP9YO00507 2555 aaPredicted RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 ABCA12Q86UK0 2595 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 USP9XQ93008 2570 aaPredicted RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 NBEAL1Q6ZS30 2694 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 MCM3APO60318 1980 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 SCN10AQ9Y5Y9 1956 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 GOLGA8QA0A0J9YX86 632 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 TEX50A0A1B0GTY4 177 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 M0R2N4 97 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 CCRL2O00421 344 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 NOS1APO75052 506 aaPredicted RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 YEATS4O95619 227 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 FADS2O95864 444 aaKnown RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 IL6P05231 212 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 RD3LP0DJH9 198 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 CRYGAP11844 174 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 CASQ1P31415 396 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 CNBPP62633 177 aaKnown RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 RPS24P62847 133 aaKnown RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 PSG9Q00887 426 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 RPL18Q07020 188 aaKnown RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 EBPQ15125 230 aaKnown RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 SYCP1Q15431 976 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 ZNHIT3Q15649 155 aaPredicted RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 MPV17LQ2QL34 196 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 FAM45BPQ6NSW5 357 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 SPINK6Q6UWN8 80 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 SBSNQ6UWP8 590 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 ZNF550Q7Z398 422 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 PHF13Q86YI8 300 aaPredicted RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 BPIFA4PQ86YQ2 179 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 OR2T4Q8NH00 348 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 HAVCR2Q8TDQ0 301 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 SLC37A2Q8TED4 501 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 MSANTD3Q96H12 275 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 NABP2Q9BQ15 211 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 GINS4Q9BRT9 223 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 NDEL1Q9GZM8 345 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 TLNRD1Q9H1K6 362 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 HES4Q9HCC6 221 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 TAS2R4Q9NYW5 299 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 CKLFQ9UBR5 152 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 ANAPC10Q9UM13 185 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 PXMP4Q9Y6I8 212 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 VPS13BQ7Z7G8 4022 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 A0A1W2PP64 1363 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 MUC4Q99102 2169 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 ACACBO00763 2458 aa-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 PRKDCP78527 4128 aaKnown RBP-0.11□□□□□ -2.43
PDGFC-208ENST00000512711 ANK2Q01484 3957 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MGAM2Q2M2H8 2515 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 NIPBLQ6KC79 2804 aaeCLIP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 LAMA5O15230 3695 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MYCBP2O75592 4640 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 DYNC1H1Q14204 4646 aaKnown RBP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 CELSR3Q9NYQ7 3312 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MYO15AQ9UKN7 3530 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 CITO14578 2027 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 CHD9Q3L8U1 2897 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 C1orf232A0A0U1RR37 186 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 FABP5P3A8MUU1 101 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 GOLGA8MH3BSY2 632 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 M0R378 163 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 LST1O00453 97 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 INE1O15225 51 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 KLF7O75840 302 aaPredicted RBP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 CLPSP04118 112 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 CTSDP07339 412 aaPredicted RBP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 HTR1AP08908 422 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MGST1P10620 155 aaKnown RBP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 KDELR2P33947 212 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 SSR2P43308 183 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 MT4P47944 62 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 ZNF80P51504 273 aaPredicted RBP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 CLDN12P56749 244 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 POLR2GP62487 172 aaKnown RBP eCLIP-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 FABP9Q0Z7S8 132 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 STX5Q13190 355 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 PDE6HQ13956 83 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 KISS1Q15726 138 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 SPRNQ5BIV9 151 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 TNFAIP8L3Q5GJ75 292 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 SPANXN5Q5MJ07 72 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 LPCAT4Q643R3 524 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 C5orf46Q6UWT4 87 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 DPPA3Q6W0C5 159 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 SOSTDC1Q6X4U4 206 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 Q6ZQT0 140 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 ZNF826PQ6ZT77 177 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 GRINAQ7Z429 371 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 CLECL1Q8IZS7 167 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 TMEM156Q8N614 296 aa-0.12□□□□□ -2.43
PDGFC-208ENST00000512711 OR7G1Q8NGA0 311 aa-0.12□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms