RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 UBE2D1P51668 147 aa7.49□□□□□ -1.21
VCAN-208ENST00000512590 C1orf122Q6ZSJ8 110 aa7.49□□□□□ -1.21
VCAN-208ENST00000512590 IGLV2-23P01705 113 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 CRYBB3P26998 211 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 DUTP33316 252 aaKnown RBP7.48□□□□□ -1.21
VCAN-208ENST00000512590 UBE2E1P51965 193 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 BIVMQ86UB2 503 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 ZNF525Q8N782 197 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 NEUROG1Q92886 237 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 TM2D2Q9BX73 214 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 IFI27L2Q9H2X8 130 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 C4BP0C0L5 1744 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 IGFBP2P18065 325 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 DEFB131AP59861 70 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 ZNF362Q5T0B9 420 aaPredicted RBP7.48□□□□□ -1.21
VCAN-208ENST00000512590 TEX43Q6ZNM6 134 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 SSC5DA1L4H1 1573 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE12JA6NER3 117 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 ZFPL1O95159 310 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 ARL14EPLP0DKL9 152 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 FOXF2Q12947 444 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE1Q13065 139 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE4Q13068 117 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE5Q13069 117 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE13Q4V321 117 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 PMCHL2Q9BQD1 86 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 HSPB9Q9BQS6 159 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 TRBV25-1A0A075B6N4 114 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GCM2O75603 506 aaPredicted RBP7.48□□□□□ -1.21
VCAN-208ENST00000512590 NBEAP1P0C6P0 100 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 ATP5IP56385 69 aaPredicted RBP7.48□□□□□ -1.21
VCAN-208ENST00000512590 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 WFIKKN1Q96NZ8 548 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 MYH2Q9UKX2 1941 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE12BA1L429 117 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 EPOPA6NHQ4 379 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE7O76087 117 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 MPC2O95563 127 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE12FP0CL80 117 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE12GP0CL81 117 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 GAGE12IP0CL82 117 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 INAFM2P0DMQ5 153 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 KLRD1Q13241 179 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 CD300EQ496F6 205 aaPredicted RBP7.48□□□□□ -1.21
VCAN-208ENST00000512590 RARRES2Q99969 163 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 OVOL2Q9BRP0 275 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 C4AP0C0L4 1744 aa7.48□□□□□ -1.21
VCAN-208ENST00000512590 ESDP10768 282 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 INSL4Q14641 139 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 PVRIGQ6DKI7 326 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 CD200R1LQ6Q8B3 271 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 CYB561D1Q8N8Q1 229 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 FOLR2P14207 255 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 ZNF250P15622 560 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 CSRP3P50461 194 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.47□□□□□ -1.21
VCAN-208ENST00000512590 FMC1Q96HJ9 113 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 NHP2Q9NX24 153 aaKnown RBP7.47□□□□□ -1.21
VCAN-208ENST00000512590 PRSS29PA6NIE9 313 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 PGFP49763 221 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 SCAND1P57086 179 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 ZIC1Q15915 447 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 TPTE2P1Q5T6R2 138 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 HIST1H2BAQ96A08 127 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 ZNF257Q9Y2Q1 563 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 A0A0U1RQV5 110 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 A6NNC1 897 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 MINOS1Q5TGZ0 78 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 SLC22A18ASQ8N1D0 253 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 FGFRL1Q8N441 504 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 IMMP1LQ96LU5 166 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 BPESC1Q9GZL8 116 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 MINOS1-NBL1R4GNA1 71 aa7.47□□□□□ -1.21
VCAN-208ENST00000512590 A0A1B0GUS0 222 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 TMEM178BH3BS89 294 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 CCL3L1P16619 93 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 RELAQ04206 551 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 C9orf153Q5TBE3 101 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 TEX37Q96LM6 180 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 MRM2Q9UI43 246 aaKnown RBP7.46□□□□□ -1.21
VCAN-208ENST00000512590 F8VVB4 439 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 F8VWA3 439 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 J3QLI3 93 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 NDUFB1O75438 58 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 SPATA45Q537H7 98 aa7.46□□□□□ -1.21
VCAN-208ENST00000512590 TRAV8-2A0A0B4J237 113 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 TRAV8-4A0A0B4J246 113 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 GAGE2EQ4V326 116 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 DEFB105AQ8NG35 78 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 BAALCQ8WXS3 180 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 REG4Q9BYZ8 158 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 GAGE2DQ9UEU5 116 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 IGHV1-2P23083 117 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 CA7P43166 264 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 EVX1P49640 407 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 MTFP1Q9UDX5 166 aa7.46□□□□□ -1.22
VCAN-208ENST00000512590 ZNF142P52746 1687 aaPredicted RBP7.46□□□□□ -1.22
VCAN-208ENST00000512590 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.22
VCAN-208ENST00000512590 RCC1P18754 421 aaPredicted RBP7.46□□□□□ -1.22
VCAN-208ENST00000512590 RNF138Q8WVD3 245 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms