RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 GSKIPQ9P0R6 139 aa15.29■□□□□ 0.04
SMAD1-211ENST00000512019 CYB5BO43169 146 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 FBXO24O75426 580 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 IGLV1-40P01703 118 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 CRYGCP07315 174 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 ELANEP08246 267 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 NKX2-1P43699 371 aaPredicted RBP15.28■□□□□ 0.04
SMAD1-211ENST00000512019 C2orf68Q2NKX9 166 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 CXorf66Q5JRM2 361 aaPredicted RBP15.28■□□□□ 0.04
SMAD1-211ENST00000512019 TMEM65Q6PI78 240 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 C10orf99Q6UWK7 81 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 OR4D5Q8NGN0 318 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 C2orf50Q96LR7 162 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 ZNF355PQ9NSJ1 428 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 MGAT4CQ9UBM8 478 aa15.28■□□□□ 0.04
SMAD1-211ENST00000512019 SOX15O60248 233 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 REG1AP05451 166 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 PF4V1P10720 104 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 DEFA4P12838 97 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 CTRB1P17538 263 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 PSMB8P28062 276 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 CTRB2Q6GPI1 263 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 OR2C3Q8N628 320 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 HIPK2Q9H2X6 1198 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 RBKSQ9H477 322 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 SLA2Q9H6Q3 261 aa15.27■□□□□ 0.04
SMAD1-211ENST00000512019 WRBO00258 174 aa15.26■□□□□ 0.03
SMAD1-211ENST00000512019 BRI3O95415 125 aa15.26■□□□□ 0.03
SMAD1-211ENST00000512019 SCGB1D2O95969 90 aa15.26■□□□□ 0.03
SMAD1-211ENST00000512019 SNCAP37840 140 aa15.26■□□□□ 0.03
SMAD1-211ENST00000512019 RNF152Q8N8N0 203 aa15.26■□□□□ 0.03
SMAD1-211ENST00000512019 ZNF114Q8NC26 417 aa15.26■□□□□ 0.03
SMAD1-211ENST00000512019 OR1L6Q8NGR2 347 aa15.26■□□□□ 0.03
SMAD1-211ENST00000512019 DTD1Q8TEA8 209 aa15.26■□□□□ 0.03
SMAD1-211ENST00000512019 HEYLQ9NQ87 328 aaPredicted RBP15.26■□□□□ 0.03
SMAD1-211ENST00000512019 LY86O95711 162 aa15.25■□□□□ 0.03
SMAD1-211ENST00000512019 HIST1H1BP16401 226 aaKnown RBP15.25■□□□□ 0.03
SMAD1-211ENST00000512019 CYCSP99999 105 aaKnown RBP15.25■□□□□ 0.03
SMAD1-211ENST00000512019 ID3Q02535 119 aa15.25■□□□□ 0.03
SMAD1-211ENST00000512019 CIB3Q96Q77 187 aaPredicted RBP15.25■□□□□ 0.03
SMAD1-211ENST00000512019 F11RQ9Y624 299 aaKnown RBP15.25■□□□□ 0.03
SMAD1-211ENST00000512019 SYNGR2O43760 224 aa15.24■□□□□ 0.03
SMAD1-211ENST00000512019 SIX6O95475 246 aa15.24■□□□□ 0.03
SMAD1-211ENST00000512019 CD28P10747 220 aa15.24■□□□□ 0.03
SMAD1-211ENST00000512019 HTR2BP41595 481 aa15.24■□□□□ 0.03
SMAD1-211ENST00000512019 SUB1P53999 127 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMAD1-211ENST00000512019 TPPP2P59282 170 aa15.24■□□□□ 0.03
SMAD1-211ENST00000512019 RRAS2P62070 204 aaPredicted RBP15.24■□□□□ 0.03
SMAD1-211ENST00000512019 OR1P1Q8NH06 330 aa15.24■□□□□ 0.03
SMAD1-211ENST00000512019 MS4A10Q96PG2 267 aa15.24■□□□□ 0.03
SMAD1-211ENST00000512019 NMES1Q9C002 83 aa15.24■□□□□ 0.03
SMAD1-211ENST00000512019 MAGT1Q9H0U3 335 aa15.24■□□□□ 0.03
SMAD1-211ENST00000512019 PRH1P02810 166 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 TRGV3P03979 118 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 RAB9AP51151 201 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 H2BFSP57053 126 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 FCN2Q15485 313 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 KHDC1LQ5JSQ8 128 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 C11orf44Q8N8P7 122 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 SLC24A4Q8NFF2 622 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 P2RX4Q99571 388 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 ZFP57Q9NU63 452 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 THYN1Q9P016 225 aa15.23■□□□□ 0.03
SMAD1-211ENST00000512019 TCRBV4S1A1TA0A5B7 111 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 FAM223BA6NKX1 122 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 SSSCA1O60232 199 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 MBPP02686 304 aaPredicted RBP15.22■□□□□ 0.03
SMAD1-211ENST00000512019 RPLP1P05386 114 aaKnown RBP15.22■□□□□ 0.03
SMAD1-211ENST00000512019 IAPPP10997 89 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 POLR2GP62487 172 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMAD1-211ENST00000512019 CD83Q01151 205 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 TCTEX1D4Q5JR98 221 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 Q6ZNX1 250 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 C19orf35Q6ZS72 473 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 NOXA1Q86UR1 476 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 FAM223AQ8IWN6 122 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 NECAP1Q8NC96 275 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 KLK15Q9H2R5 256 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 TSSC4Q9Y5U2 329 aaPredicted RBP15.22■□□□□ 0.03
SMAD1-211ENST00000512019 U3KQ87 197 aa15.22■□□□□ 0.03
SMAD1-211ENST00000512019 IGLV11-55A0A075B6I3 123 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 TRBV9A0A0B4J1U6 114 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 A0A0G2JLM5 398 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 G3V4G9 280 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 RNASE2P10153 161 aaKnown RBP15.21■□□□□ 0.03
SMAD1-211ENST00000512019 S100A10P60903 97 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 RPP30P78346 268 aaKnown RBP15.21■□□□□ 0.03
SMAD1-211ENST00000512019 RHOGP84095 191 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 KLK9Q2XQG4 91 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 BSXQ3C1V8 233 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 SLC25A24Q6NUK1 477 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 LCNL1Q6ZST4 164 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 OR11H7Q8NGC8 314 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 MYOZ3Q8TDC0 251 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 ASB13Q8WXK3 278 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 USMG5Q96IX5 58 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 FANCD2OSQ96PS1 177 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 RAB40CQ96S21 281 aa15.21■□□□□ 0.03
SMAD1-211ENST00000512019 CITED2Q99967 270 aaPredicted RBP15.21■□□□□ 0.03
SMAD1-211ENST00000512019 KLK9Q9UKQ9 250 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms