RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 HSPB1P04792 205 aaKnown RBP4.89□□□□□ -1.63
USP38-203ENST00000511739 SLC25A34Q6PIV7 304 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 TCF23Q7RTU1 214 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 PILRAQ9UKJ1 303 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 CEP290O15078 2479 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 PEX7O00628 323 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 NBEAP1P0C6P0 100 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 SMIM10L1P0DMW3 83 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 MEF2BQ02080 365 aaPredicted RBP4.89□□□□□ -1.63
USP38-203ENST00000511739 SPATA45Q537H7 98 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 OR10J3Q5JRS4 329 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 ZNF506Q5JVG8 444 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 FAM201AQ5SY85 155 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 DTX1Q86Y01 620 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 TTC9CQ8N5M4 171 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 SMIM10Q96HG1 83 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 ATRXP46100 2492 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 FNDC1Q4ZHG4 1894 aaPredicted RBP4.89□□□□□ -1.63
USP38-203ENST00000511739 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.89□□□□□ -1.63
USP38-203ENST00000511739 IGKV1D-16P01601 117 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 SOD3P08294 240 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 SMIM13P0DJ93 91 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 RPL39P5Q59GN2 51 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 OR4D11Q8NGI4 311 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 ZNF414Q96IQ9 312 aa4.89□□□□□ -1.63
USP38-203ENST00000511739 MRPL18Q9H0U6 180 aaKnown RBP4.89□□□□□ -1.63
USP38-203ENST00000511739 TRAV12-3A0A0B4J271 114 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 IGKV1-8A0A0C4DH67 115 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 MSGN1A6NI15 193 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 E9PLN8 166 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 NBR2O15453 112 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 MDKP21741 143 aaPredicted RBP4.88□□□□□ -1.63
USP38-203ENST00000511739 GNLYP22749 145 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 LINC00158P58513 81 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 BIVMQ86UB2 503 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 LURAP1LQ8IV03 231 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 DRAM1Q8N682 238 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 VKORC1Q9BQB6 163 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 MDC1Q14676 2089 aaKnown RBP4.88□□□□□ -1.63
USP38-203ENST00000511739 GCM2O75603 506 aaPredicted RBP4.88□□□□□ -1.63
USP38-203ENST00000511739 CRYBA2P53672 197 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 RIPPLY3P57055 190 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 ZNF818PQ6ZRF7 136 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 CYB561D1Q8N8Q1 229 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 HIST1H2BAQ96A08 127 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 KLK13Q9UKR3 277 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 SPTBN1Q01082 2364 aaKnown RBP4.88□□□□□ -1.63
USP38-203ENST00000511739 MUC21A0A0G2JKD1 596 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 MUC21A0A140T8X8 626 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 GRIFINA4D1Z8 144 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 SRIP30626 198 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 ZP1P60852 638 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 NPCDR1Q9BY65 106 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 IFT22Q9H7X7 185 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 ST20Q9HBF5 79 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 NLRC5Q86WI3 1866 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 INS-IGF2F8WCM5 200 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 INSP01308 110 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 FHITP49789 147 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 C20orf204Q6ZNR8 217 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 B4DSR2 109 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 NAPSAO96009 420 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 UBE2V2Q15819 145 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 ACP7Q6ZNF0 438 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 FAM169BQ8N8A8 192 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 IFI27L2Q9H2X8 130 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 SCN5AQ14524 2016 aa4.88□□□□□ -1.63
USP38-203ENST00000511739 TGIF2-C20orf24A0A0A6YYL0 155 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 IGHV2OR16-5A0A0B4J2B6 119 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 TMEM50AO95807 157 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 RHOGP84095 191 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 VAX1Q5SQQ9 334 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 RNF182Q8N6D2 247 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 RNF166Q96A37 237 aaPredicted RBP4.87□□□□□ -1.63
USP38-203ENST00000511739 MARVELD1Q9BSK0 173 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 SEC16AO15027 2179 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 EPOPA6NHQ4 379 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 APOMO95445 188 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 MESP2Q0VG99 397 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 ESPL1Q14674 2120 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 PSMG4Q5JS54 123 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 SELENOHQ8IZQ5 122 aaKnown RBP4.87□□□□□ -1.63
USP38-203ENST00000511739 OR1P1Q8NH06 330 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 SLC50A1Q9BRV3 221 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 SMDT1Q9H4I9 107 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 NRN1Q9NPD7 142 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 GGTLC3B5MD39 225 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 TCF21O43680 179 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 KIAA1644Q3SXP7 199 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 FER1L6-AS1Q8NA97 138 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 OR2K2Q8NGT1 345 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 NEUROG1Q92886 237 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 GPHA2Q96T91 129 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 RARRES2Q99969 163 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 PMCHL2Q9BQD1 86 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 KLHDC2Q9Y2U9 406 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 DOCK6Q96HP0 2047 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.87□□□□□ -1.63
USP38-203ENST00000511739 IGLV3-19P01714 112 aa4.87□□□□□ -1.63
USP38-203ENST00000511739 CD28P10747 220 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms