RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 MIEN1Q9BRT3 115 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 ZNF471Q9BX82 626 aaPredicted RBP1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 PLA2G2FQ9BZM2 168 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 SMDT1Q9H4I9 107 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 TPT1P8Q9HAU6 139 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 IL36BQ9NZH7 164 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 JPT1Q9UK76 154 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 FUT9Q9Y231 359 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 YLPM1P49750 1951 aaKnown RBP1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 LRP4O75096 1905 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 LOXHD1Q8IVV2 1947 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 CEP152O94986 1710 aa1.52□□□□□ -2.17
DEPDC1B-204ENST00000509006 CAMSAP2Q08AD1 1489 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 NEO1Q92859 1461 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 GTF3C1Q12789 2109 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 PTPRJQ12913 1337 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TRIP11Q15643 1979 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGLV4-60A0A075B6I1 120 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGLV3-16A0A075B6K0 115 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TRGV10A0A0A0MS01 117 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGHV3-73A0A0B4J1V6 119 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TRAV5A0A0B4J249 113 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TRAV40A0A0B4J280 105 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGKV1-12A0A0C4DH73 117 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TMEM235A6NFC5 223 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TLCD2A6NGC4 264 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 ZNF98A6NK75 572 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 CLDN25C9JDP6 229 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 H3BMM0 161 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TRAPPC2LH3BP13 241 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TP53I11O14683 189 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 ZNF861PO60384 105 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 ZNF324O75467 553 aaPredicted RBP1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGKV1D-33P01593 117 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGKV1-33P01594 117 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGKV1D-12P01611 117 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 GPX2P18283 190 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 CRHBPP24387 322 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 CD24P25063 80 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 PSMB8P28062 276 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 CCR2P41597 374 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 RBM11P57052 281 aaKnown RBP1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 DEFA1P59665 94 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 CKS1BP61024 79 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 RPL18Q07020 188 aaKnown RBP1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 MIAQ16674 131 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 AADACL3Q5VUY0 350 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 NOXRED1Q6NXP6 359 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 ZNF705AQ6ZN79 300 aaPredicted RBP1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 LCA10Q71F78 164 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 OR8I2Q8N0Y5 310 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TMEM86AQ8N2M4 240 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 ZNF283Q8N7M2 679 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 ST20-AS1Q8NBB2 130 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 RPS4Y2Q8TD47 263 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 KLF14Q8TD94 323 aaPredicted RBP1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 H1FXQ92522 213 aaKnown RBP1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 UBE2WQ96B02 151 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGF2BP2-AS1Q96M15 143 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 CCDC115Q96NT0 180 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 SCGB3A1Q96QR1 104 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 SEC22CQ9BRL7 303 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TSSK6Q9BXA6 273 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 PLA2G12AQ9BZM1 189 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 TXNL4BQ9NX01 149 aaKnown RBP1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 LINC00588Q9Y4M8 146 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 KIF1BO60333 1816 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 LTBP1Q14766 1721 aa1.51□□□□□ -2.17
DEPDC1B-204ENST00000509006 MED23Q9ULK4 1368 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 VIRMAQ69YN4 1812 aaKnown RBP1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGSF9BQ9UPX0 1349 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 IGLV3-12A0A075B6K2 115 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 TRAV36DV7A0A075B6V5 113 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 A0A087X0T9 212 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 A0A0B4J2C4 111 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 A0A0J9YW62 118 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 MEIS3P1A6NDR6 274 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 GGT3PA6NGU5 568 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 A8MWP4 228 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 H3BQ85 93 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 J3QR89 54 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 SLC22A1O15245 554 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 PSCAO43653 123 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 CST7O76096 145 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 TCL1BO95988 128 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 TRGV3P03979 118 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 ZNF286BP0CG31 522 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 MUC1P15941 1255 aaPredicted RBP1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 LGALS3P17931 250 aaKnown RBP1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 GZMHP20718 246 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 NFYBP25208 207 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 CMPK1P30085 196 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 RPS11P62280 158 aaKnown RBP eCLIP1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 LSM3P62310 102 aaKnown RBP1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 PSPHP78330 225 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 PSG9Q00887 426 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 MEF2BQ02080 365 aaPredicted RBP1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 ZNF117Q03924 483 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 BAMBIQ13145 260 aa1.5□□□□□ -2.17
DEPDC1B-204ENST00000509006 ZNF141Q15928 474 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms