RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 Q6ZRN7 208 aaPredicted RBP1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 C7orf65Q6ZTY9 151 aa1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 ZNF563Q8TA94 476 aa1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 KLK6Q92876 244 aa1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 ZNF625Q96I27 306 aaPredicted RBP1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 C8orf76Q96K31 380 aa1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 PPP1R2P1Q96PQ5 205 aa1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 TSPAN32Q96QS1 320 aa1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 NIPSNAP1Q9BPW8 284 aa1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 NAA38Q9BRA0 125 aaKnown RBP1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 MRPL27Q9P0M9 148 aaKnown RBP1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 MTUS2Q5JR59 1369 aa1.41□□□□□ -2.18
COL4A3BP-205ENST00000508692 RGS12O14924 1447 aa1.4□□□□□ -2.18
COL4A3BP-205ENST00000508692 WRNQ14191 1432 aaPredicted RBP eCLIP1.4□□□□□ -2.18
COL4A3BP-205ENST00000508692 SMARCA4P51532 1647 aa1.4□□□□□ -2.18
COL4A3BP-205ENST00000508692 MPDZO75970 2070 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 DPRXA6NFQ7 191 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 OR4C46A6NHA9 309 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 FAAHO00519 579 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 SDCBPO00560 298 aaPredicted RBP1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 ZNF737O75373 536 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 TCRBP04435 133 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 GPX2P18283 190 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 RANP62826 216 aaKnown RBP1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 HIST1H3AP68431 136 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 H3F3AP84243 136 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 FADDQ13158 208 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 OR6V1Q8N148 313 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 DEFB119Q8N690 84 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 OR8B3Q8NGG8 313 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 TOMM6Q96B49 74 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 SCGB3A1Q96QR1 104 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 TRIM4Q9C037 500 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 C20orf27Q9GZN8 174 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 PKIGQ9Y2B9 76 aa1.4□□□□□ -2.19
COL4A3BP-205ENST00000508692 TRAV9-1A0A075B6T8 112 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 TRAV26-2A0A0B4J265 109 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 EXOC1LA0A1B0GW35 172 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 TRAPPC13A5PLN9 417 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 TRAPPC2LH3BP13 241 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 PIRO00625 290 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 CRYZL1O95825 349 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 IGKV1-5P01602 117 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 ZNF705BP0CI00 300 aaPredicted RBP1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 MAGEA12P43365 314 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 EIF2B2P49770 351 aaKnown RBP1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 SPA17Q15506 151 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 KCNJ8Q15842 424 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 IAH1Q2TAA2 248 aaPredicted RBP1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 ARHGAP11BQ3KRB8 267 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 TMEM97Q5BJF2 176 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 DHFR2Q86XF0 187 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 OR5B17Q8NGF7 314 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 DCSTAMPQ9H295 470 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 GLTPQ9NZD2 209 aa1.39□□□□□ -2.19
COL4A3BP-205ENST00000508692 COL11A1P12107 1806 aaPredicted RBP1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 MDC1Q14676 2089 aaKnown RBP1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 FUOMA2VDF0 154 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 SMIM9A6NGZ8 99 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 RBP1P09455 135 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 AP3S2P59780 193 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 SUPT4H1P63272 117 aaKnown RBP1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 MOGQ16653 247 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 TMEM106AQ96A25 262 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 TMEM147Q9BVK8 224 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 YIPF3Q9GZM5 350 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 CCDC90BQ9GZT6 254 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 TLNRD1Q9H1K6 362 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 CKLFQ9UBR5 152 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 BAIAP2Q9UQB8 552 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 DOCK10Q96BY6 2186 aa1.38□□□□□ -2.19
COL4A3BP-205ENST00000508692 NCKAP5O14513 1909 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 A0A087WUJ7 227 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 IGKV2-29A2NJV5 120 aaPredicted RBP1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 TMEM210A6NLX4 147 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 FADS1O60427 444 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 CNIH1O95406 144 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 HAND1O96004 215 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 PMP2P02689 132 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 CRPP02741 224 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 RPSAP08865 295 aaKnown RBP1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 CDK10Q15131 360 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 NNATQ16517 81 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 Q1T7F1 81 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 FAM173BQ6P4H8 233 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 MIR17HGQ75NE6 70 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 AAED1Q7RTV5 226 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 DEFB128Q7Z7B8 93 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 KRT222Q8N1A0 295 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 CT55Q8WUE5 264 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 GINS4Q9BRT9 223 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 CYSTM1Q9H1C7 97 aa1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 C11orf68Q9H3H3 251 aaKnown RBP1.37□□□□□ -2.19
COL4A3BP-205ENST00000508692 RTL1A6NKG5 1358 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 TOPBP1Q92547 1522 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 IGKV1D-43A0A0B4J1Z2 117 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 TRBV6-5A0A0K0K1A5 114 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 IBA57-AS1B1ANH7 110 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 C19orf84I3L1E1 186 aa1.36□□□□□ -2.19
COL4A3BP-205ENST00000508692 PIK3C2GO75747 1445 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms