RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 HLA-DQB1P01920 261 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 DEFA4P12838 97 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 RAB6AP20340 208 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 GPR183P32249 361 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 INPP1P49441 399 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 TAS2R20P59543 309 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 PLA2G7Q13093 441 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 TRIM16LQ309B1 348 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 C2orf76Q3KRA6 126 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 Q6ZS49 121 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 KCTD9Q7L273 389 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 VKORC1L1Q8N0U8 176 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 ZNF645Q8N7E2 425 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 OR5B3Q8NH48 314 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 CD300LFQ8TDQ1 290 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 SMIM4Q8WVI0 70 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 TRIM63Q969Q1 353 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 HRH4Q9H3N8 390 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 DIABLOQ9NR28 239 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 AGRNO00468 2067 aa6.87□□□□□ -1.31
NEDD9-211ENST00000508546 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 A0A0A6YYH2 397 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 IGHV3-35A0A0C4DH35 117 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 PRSS29PA6NIE9 313 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 A6NJ64 397 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 CTDSPLO15194 276 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 TGOLN2O43493 480 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 SCGNO76038 276 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 SLC22A5O76082 557 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 CMC4P56277 68 aaPredicted RBP6.86□□□□□ -1.31
NEDD9-211ENST00000508546 RPL30P62888 115 aaKnown RBP6.86□□□□□ -1.31
NEDD9-211ENST00000508546 MRPS10P82664 201 aaKnown RBP6.86□□□□□ -1.31
NEDD9-211ENST00000508546 ASAH1Q13510 395 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 OXA1LQ15070 435 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 RNASE12Q5GAN4 147 aaKnown RBP6.86□□□□□ -1.31
NEDD9-211ENST00000508546 HACD4Q5VWC8 232 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 APRG1Q8IVJ8 170 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 CENPSQ8N2Z9 138 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 OR4S2Q8NH73 311 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 C15orf40Q8WUR7 153 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 RAB3CQ96E17 227 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 ABHD1Q96SE0 405 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 ATG5Q9H1Y0 275 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 AUNIPQ9H7T9 357 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 THYN1Q9P016 225 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 RAB22AQ9UL26 194 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 TBC1D24Q9ULP9 559 aa6.86□□□□□ -1.31
NEDD9-211ENST00000508546 RBMX2Q9Y388 322 aaKnown RBP6.86□□□□□ -1.31
NEDD9-211ENST00000508546 APOBP04114 4563 aaKnown RBP6.86□□□□□ -1.31
NEDD9-211ENST00000508546 A0A1B0GVG6 124 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 METTL21EPA6NDL7 271 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 CGB1A6NKQ9 187 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 GABARAPH6UMI1 98 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 K7EMT4 169 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 MFNGO00587 321 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 RTL8CO15255 209 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 GSTZ1O43708 216 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-211ENST00000508546 REG1AP05451 166 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 CTSDP07339 412 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-211ENST00000508546 RPL8P62917 257 aaKnown RBP6.85□□□□□ -1.31
NEDD9-211ENST00000508546 OR2B11Q5JQS5 317 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 SPSB3Q6PJ21 355 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 OR4A5Q8NH83 315 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 VN1R17PQ8TDU5 208 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 MAFIPQ8WZ33 124 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 ATP6V0BQ99437 205 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 HSD17B10Q99714 261 aaKnown RBP6.85□□□□□ -1.31
NEDD9-211ENST00000508546 OR2W1Q9Y3N9 320 aa6.85□□□□□ -1.31
NEDD9-211ENST00000508546 hCG_2014768A0A024R1R8 64 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 TRAV18A0A075B6X5 111 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 LINC00854A0A1B0GVQ3 168 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 IGLC7A0M8Q6 106 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 NDUFA4O00483 81 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 DEFB4AO15263 64 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 HRASP01112 189 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 IGLV2-14P01704 120 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 HLA-GP17693 338 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 BRWD1-AS2P59051 145 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 OR2B8PP59922 312 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 EIF4EBP1Q13541 118 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-211ENST00000508546 ZNF124Q15973 351 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 Q6ZNX1 250 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 SSX9Q7RTT3 188 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 FCAMRQ8WWV6 532 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 BSCL2Q96G97 398 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-211ENST00000508546 SRSF8Q9BRL6 282 aaKnown RBP6.84□□□□□ -1.31
NEDD9-211ENST00000508546 BET1LQ9NYM9 111 aa6.84□□□□□ -1.31
NEDD9-211ENST00000508546 IGHV4-4A0A075B6R2 117 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 IGKV1D-8A0A087WSZ0 117 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 C15orf62A8K5M9 175 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 RAB27BO00194 218 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 CYB5BO43169 146 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 LYRM1O43325 122 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 CTXN2P0C2S0 81 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 PTHLHP12272 177 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 RPA2P15927 270 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 HIST1H1DP16402 221 aaKnown RBP6.83□□□□□ -1.32
NEDD9-211ENST00000508546 GNB3P16520 340 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 AP3S2P59780 193 aa6.83□□□□□ -1.32
NEDD9-211ENST00000508546 TMEM187Q14656 261 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms