RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CPSF4LA6NMK7 179 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 BUB1B-PAK6H3BSN5 160 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 AZIN1O14977 448 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 PPP1R2P9O14990 202 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 ZNF737O75373 536 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 IGKV1D-33P01593 117 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 IGKV1-33P01594 117 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 RBP4P02753 201 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 TPM3P06753 285 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 LGALS1P09382 135 aaKnown RBP1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 MT1HL1P0DM35 61 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 TROVE2P10155 538 aaKnown RBP eCLIP1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 NEFHP12036 1026 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 BRS3P32247 399 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 BMI1P35226 326 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 RAB9AP51151 201 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 CLDN8P56748 225 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 SEC61GP60059 68 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 KRTAP10-4P60372 401 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 TPM4P67936 248 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 FAM3AP98173 230 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 DEFA5Q01523 94 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 MEF2CQ06413 473 aaPredicted RBP1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 HES1Q14469 280 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 HLA-DRB5Q30154 266 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 C10orf107Q8IVU9 208 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 NKAIN4Q8IVV8 208 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 MICU2Q8IYU8 434 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 MS4A15Q8N5U1 240 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 ZNF676Q8N7Q3 588 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC35G3Q8N808 338 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 ZFP41Q8N8Y5 198 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 ZNF680Q8NEM1 530 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 GPR32P1Q8NGA4 272 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 OR52L1Q8NGH7 329 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 OR9G4Q8NGQ1 327 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 OR8S1Q8NH09 359 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 LEAP2Q969E1 77 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC35B4Q969S0 331 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 ZBTB18Q99592 522 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC22A4Q9H015 551 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 PLEKHA1Q9HB21 404 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 ATPIF1Q9UII2 106 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 COMMD3-BMI1R4GMX3 469 aa1.95□□□□□ -2.1
TOPBP1-206ENST00000508524 TRAV27A0A087WT01 109 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 ARRDC5A6NEK1 342 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 TMEM114B3SHH9 223 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 H0Y980 276 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 POLR3GO15318 223 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 CHP2O43745 196 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 IGLV6-57P01721 117 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 TAC1P20366 129 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 NAA10P41227 235 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 REG1BP48304 166 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 RND2P52198 227 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 EDDM3BP56851 147 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 SYNJ2BPP57105 145 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 TCTAP57738 103 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 RGS8P57771 180 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 DSTNP60981 165 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 DR1Q01658 176 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 EDDM3AQ14507 147 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 DHRS4L2Q6PKH6 230 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 ZYG11AQ6WRX3 759 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 LINC00596Q86U02 117 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 TGIF2LXQ8IUE1 241 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 OR6V1Q8N148 313 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 Q8N402 240 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 OR10Z1Q8NGY1 313 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 OR5P3Q8WZ94 311 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 AQP3Q92482 292 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 SGTBQ96EQ0 304 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 PPP1R36Q96LQ0 422 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 Q96M85 177 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 ZNF714Q96N38 554 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 HSD17B10Q99714 261 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 HDHD2Q9H0R4 259 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 SYT4Q9H2B2 425 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 RERGLQ9H628 205 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 BCL2L10Q9HD36 194 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 TP53TG1Q9Y2A0 90 aa1.94□□□□□ -2.1
TOPBP1-206ENST00000508524 LOC102724200A0A096LPH7 203 aaPredicted RBP1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 IGHV7-4-1A0A0J9YVY3 117 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 FAM183AA6NL82 134 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 NCBP2LA6PVI3 153 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 LEUTXA8MZ59 168 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 L7N2F9 121 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 M0R135 149 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 EIF3HO15372 352 aaKnown RBP eCLIP1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC16A7O60669 478 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 IFNA4P05014 189 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 CDK2P24941 298 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 HLA-DMBP28068 263 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 BLVRBP30043 206 aaPredicted RBP1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 GPR4P46093 362 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 DNAJB13P59910 316 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 LSM6P62312 80 aaKnown RBP1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 PRDX4Q13162 271 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 FAM122BQ7Z309 247 aa1.93□□□□□ -2.1
TOPBP1-206ENST00000508524 SLC22A9Q8IVM8 553 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms