RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 CADM3Q8N126 398 aa10.71□□□□□ -0.69
RAB28-205ENST00000508274 SCARB1Q8WTV0 552 aa10.71□□□□□ -0.69
RAB28-205ENST00000508274 MRGPRFQ96AM1 343 aa10.71□□□□□ -0.69
RAB28-205ENST00000508274 ISOC1Q96CN7 298 aa10.71□□□□□ -0.69
RAB28-205ENST00000508274 ZNF436Q9C0F3 470 aaPredicted RBP10.71□□□□□ -0.69
RAB28-205ENST00000508274 HIPK2Q9H2X6 1198 aa10.71□□□□□ -0.69
RAB28-205ENST00000508274 IGHV3OR16-8A0A075B7F1 116 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 K7EIM0 57 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 CD3DP04234 171 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 S100GP29377 79 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 IZUMO4Q1ZYL8 232 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 UBAC2Q8NBM4 344 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 OR4D10Q8NGI6 311 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 OR5B3Q8NH48 314 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 TMEM190Q8WZ59 177 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 AP3S1Q92572 193 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 ABHD1Q96SE0 405 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 CHRDL1Q9BU40 450 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 PALMDQ9NP74 551 aa10.7□□□□□ -0.7
RAB28-205ENST00000508274 FAM212BQ9NTI7 297 aaPredicted RBP10.7□□□□□ -0.7
RAB28-205ENST00000508274 CYB5BO43169 146 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 C8orf88P0DMB2 117 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 PGAM2P15259 253 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 RNASE10Q5GAN6 216 aaKnown RBP10.69□□□□□ -0.7
RAB28-205ENST00000508274 H2BFWTQ7Z2G1 175 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 LHFPL1Q86WI0 220 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 BSCL2Q96G97 398 aaPredicted RBP10.69□□□□□ -0.7
RAB28-205ENST00000508274 TMEM56Q96MV1 263 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 TSC22D3Q99576 134 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 C21orf62Q9NYP8 219 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 LYSTQ99698 3801 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 ADMP35318 185 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 PPP5CP53041 499 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 SLC16A13Q7RTY0 426 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 OR52B4Q8NGK2 314 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 ZNF414Q96IQ9 312 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 MIXL1Q9H2W2 232 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 FKBP11Q9NYL4 201 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 MRPL27Q9P0M9 148 aaKnown RBP10.69□□□□□ -0.7
RAB28-205ENST00000508274 MTFP1Q9UDX5 166 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 UFC1Q9Y3C8 167 aa10.69□□□□□ -0.7
RAB28-205ENST00000508274 ZNF207O43670 478 aaKnown RBP10.68□□□□□ -0.7
RAB28-205ENST00000508274 IFNA6P05013 189 aa10.68□□□□□ -0.7
RAB28-205ENST00000508274 ALDH3B2P48448 385 aa10.68□□□□□ -0.7
RAB28-205ENST00000508274 PIGPP57054 158 aa10.68□□□□□ -0.7
RAB28-205ENST00000508274 SPCS2Q15005 226 aa10.68□□□□□ -0.7
RAB28-205ENST00000508274 SPINK9Q5DT21 86 aa10.68□□□□□ -0.7
RAB28-205ENST00000508274 OR1P1Q8NH06 330 aa10.68□□□□□ -0.7
RAB28-205ENST00000508274 OR4A16Q8NH70 328 aa10.68□□□□□ -0.7
RAB28-205ENST00000508274 MARC2Q969Z3 335 aa10.68□□□□□ -0.7
RAB28-205ENST00000508274 TP53RKQ96S44 253 aa10.68□□□□□ -0.7
RAB28-205ENST00000508274 MRPS26Q9BYN8 205 aaKnown RBP10.68□□□□□ -0.7
RAB28-205ENST00000508274 IGKV1-5P01602 117 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 IGHV3-48P01763 117 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 ELLP55199 621 aaPredicted RBP10.67□□□□□ -0.7
RAB28-205ENST00000508274 RND3P61587 244 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 PRCDQ00LT1 54 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 Q56UQ5 140 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 GPR141Q7Z602 305 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 ARRDC1Q8N5I2 433 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 OR2C3Q8N628 320 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 MISP3Q96FF7 219 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 C20orf24Q9BUV8 137 aa10.67□□□□□ -0.7
RAB28-205ENST00000508274 DAZ1Q9NQZ3 744 aaKnown RBP10.67□□□□□ -0.7
RAB28-205ENST00000508274 I3L2K1 104 aa10.66□□□□□ -0.7
RAB28-205ENST00000508274 NDUFA4O00483 81 aa10.66□□□□□ -0.7
RAB28-205ENST00000508274 CTDSP2O14595 271 aa10.66□□□□□ -0.7
RAB28-205ENST00000508274 RGS5O15539 181 aa10.66□□□□□ -0.7
RAB28-205ENST00000508274 FAAP20Q6NZ36 180 aa10.66□□□□□ -0.7
RAB28-205ENST00000508274 SPSB3Q6PJ21 355 aa10.66□□□□□ -0.7
RAB28-205ENST00000508274 RBPMS2Q6ZRY4 209 aaKnown RBP10.66□□□□□ -0.7
RAB28-205ENST00000508274 OR1L6Q8NGR2 347 aa10.66□□□□□ -0.7
RAB28-205ENST00000508274 ZNF486Q96H40 463 aaPredicted RBP10.66□□□□□ -0.7
RAB28-205ENST00000508274 TRAV25A0A0B4J276 109 aa10.65□□□□□ -0.7
RAB28-205ENST00000508274 CD74P04233 296 aa10.65□□□□□ -0.7
RAB28-205ENST00000508274 CTSGP08311 255 aa10.65□□□□□ -0.7
RAB28-205ENST00000508274 HSPE1P61604 102 aaKnown RBP10.65□□□□□ -0.7
RAB28-205ENST00000508274 SCGB2B2Q4G0G5 96 aa10.65□□□□□ -0.7
RAB28-205ENST00000508274 OR13C8Q8NGS7 320 aa10.65□□□□□ -0.7
RAB28-205ENST00000508274 PINX1Q96BK5 328 aaKnown RBP10.65□□□□□ -0.7
RAB28-205ENST00000508274 ATP6V0BQ99437 205 aa10.65□□□□□ -0.7
RAB28-205ENST00000508274 UBQLN2Q9UHD9 624 aa10.65□□□□□ -0.7
RAB28-205ENST00000508274 C3orf85A0A1B0GTC6 90 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 RAB3DO95716 219 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 MT-CO2P00403 227 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 P0C879 139 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 TBPP20226 339 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 SP6Q3SY56 376 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 STEAP1BQ6NZ63 245 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 TMEM229BQ8NBD8 167 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 ZNF114Q8NC26 417 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 MARCH1Q8TCQ1 289 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 C5orf66Q9H5L9 145 aa10.65□□□□□ -0.71
RAB28-205ENST00000508274 A0A0G2JRQ6 117 aa10.64□□□□□ -0.71
RAB28-205ENST00000508274 GABARAPH6UMI1 98 aa10.64□□□□□ -0.71
RAB28-205ENST00000508274 TSPAN4O14817 238 aa10.64□□□□□ -0.71
RAB28-205ENST00000508274 AKR1C2P52895 323 aa10.64□□□□□ -0.71
RAB28-205ENST00000508274 TAS2R19P59542 299 aa10.64□□□□□ -0.71
RAB28-205ENST00000508274 ANKRD55Q3KP44 614 aa10.64□□□□□ -0.71
RAB28-205ENST00000508274 CLVS1Q8IUQ0 354 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms