RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 SSTR5P35346 364 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 MPV17P39210 176 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 CA7P43166 264 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 PCP4P48539 62 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 CEBPDP49716 269 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 COMPP49747 757 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNF83P51522 516 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 BPIFB3P59826 476 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 UBE2G1P62253 170 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 PRCDQ00LT1 54 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 UBE2V1Q13404 147 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 MYO9BQ13459 2157 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 EDDM3AQ14507 147 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 C2orf83Q53S99 150 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 SAPCD1Q5SSQ6 148 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 Q6ZT83 130 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 C22orf34Q6ZV56 151 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 C11orf53Q8IXP5 236 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 TDHQ8IZJ6 230 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 ABHD12Q8N2K0 398 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 FAM169BQ8N8A8 192 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 MDS2Q8NDY4 140 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 STXBP6Q8NFX7 210 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR1L4Q8NGR5 311 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR1L8Q8NGR8 309 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 RFESDQ8TAC1 157 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 TSKUQ8WUA8 353 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 LRRC29Q8WV35 223 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 DDB2Q92466 427 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNF714Q96N38 554 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 IFI27L2Q9H2X8 130 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 ST20Q9HBF5 79 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 SEPSECSQ9HD40 501 aaKnown RBP4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 C1RLQ9NZP8 487 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 FOXJ2Q9P0K8 574 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR51B2Q9Y5P1 312 aa4.08□□□□□ -1.76
HMGB3P16-201ENST00000508037 CABIN1Q9Y6J0 2220 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 KIAA2026Q5HYC2 2103 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 KMT2EQ8IZD2 1858 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGHV2-26A0A0B4J1V2 119 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 A0A1W2PN81 502 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 NKX6-3A6NJ46 265 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 SRRM5B3KS81 715 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 INS-IGF2F8WCM5 200 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 J3QR06 171 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 M0R2Z0 102 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 BMPR1BO00238 502 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 WNT9BO14905 357 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNHIT1O43257 154 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR2J3O76001 311 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 TOX4O94842 621 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGKV3-15P01624 115 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 PF4P02776 101 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR5AL1P0C617 328 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGFBP2P18065 325 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 NTF3P20783 257 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGHV1-2P23083 117 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 TNFSF4P23510 183 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 REG1BP48304 166 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 SUB1P53999 127 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 UBE2L3P68036 154 aaKnown RBP4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 ERHP84090 104 aaKnown RBP4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZXDAP98168 799 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 COTL1Q14019 142 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 MMDQ15546 238 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 TBR1Q16650 682 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 TDRG1Q3Y452 100 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 CT83Q5H943 113 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 SPATA31B1PQ5VZV4 182 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR4A47Q6IF82 309 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 MRPL54Q6P161 138 aaKnown RBP4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 VWA1Q6PCB0 445 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 C12orf54Q6X4T0 127 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 LINC00696Q6ZRV3 163 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 ZNF826PQ6ZT77 177 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 MIR17HGQ75NE6 70 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 VASH2Q86V25 355 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 NIT1Q86X76 327 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 DOLPP1Q86YN1 238 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 Q8N976 141 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR8B3Q8NGG8 313 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR4A5Q8NH83 315 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 C22orf15Q8WYQ4 148 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 CHCHD1Q96BP2 118 aaKnown RBP4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGF2BP2-AS1Q96M15 143 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 OR8B2Q96RD0 313 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 PMCHL2Q9BQD1 86 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 CALYQ9NYX4 217 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 IDI2-AS1Q9NZ38 188 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 DUSP13Q9UII6 198 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 COX11Q9Y6N1 276 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 CACNA1EQ15878 2313 aa4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 YLPM1P49750 1951 aaKnown RBP4.07□□□□□ -1.76
HMGB3P16-201ENST00000508037 TRAV30A0A087WSZ9 112 aa4.06□□□□□ -1.76
HMGB3P16-201ENST00000508037 IGHV2OR16-5A0A0B4J2B6 119 aa4.06□□□□□ -1.76
HMGB3P16-201ENST00000508037 KBTBD11-OT1A0A1B0GTJ5 212 aa4.06□□□□□ -1.76
HMGB3P16-201ENST00000508037 FAM231BA6NCW3 169 aa4.06□□□□□ -1.76
HMGB3P16-201ENST00000508037 A8MWL6 223 aa4.06□□□□□ -1.76
HMGB3P16-201ENST00000508037 PRR33A8MZF0 331 aa4.06□□□□□ -1.76
HMGB3P16-201ENST00000508037 UPK2O00526 184 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms