RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 HTR2BP41595 481 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 TPPP2P59282 170 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 FAM223AQ8IWN6 122 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 OR2C3Q8N628 320 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 ZBTB8BQ8NAP8 495 aaPredicted RBP15.7■□□□□ 0.1
USP53-203ENST00000507597 OR10W1Q8NGF6 305 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 SPATA3Q8NHX4 192 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 MED28Q9H204 178 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 ALG5Q9Y673 324 aa15.7■□□□□ 0.1
USP53-203ENST00000507597 CORTO00230 105 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 CD28P10747 220 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 AREGP15514 252 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 WT1-ASQ06250 92 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 SLC25A24Q6NUK1 477 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 NECAP1Q8NC96 275 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 OR1P1Q8NH06 330 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 DTD1Q8TEA8 209 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 UBE2E2Q96LR5 201 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 MS4A10Q96PG2 267 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 F11RQ9Y624 299 aaKnown RBP15.69■□□□□ 0.1
USP53-203ENST00000507597 U3KQ87 197 aa15.69■□□□□ 0.1
USP53-203ENST00000507597 A0A1B0GW64 132 aa15.68■□□□□ 0.1
USP53-203ENST00000507597 GOSR2O14653 212 aa15.68■□□□□ 0.1
USP53-203ENST00000507597 SYNGR2O43760 224 aa15.68■□□□□ 0.1
USP53-203ENST00000507597 SOX15O60248 233 aa15.68■□□□□ 0.1
USP53-203ENST00000507597 REG1AP05451 166 aa15.68■□□□□ 0.1
USP53-203ENST00000507597 CDX1P47902 265 aaPredicted RBP15.68■□□□□ 0.1
USP53-203ENST00000507597 C11orf44Q8N8P7 122 aa15.68■□□□□ 0.1
USP53-203ENST00000507597 ZNF114Q8NC26 417 aa15.68■□□□□ 0.1
USP53-203ENST00000507597 RBKSQ9H477 322 aa15.68■□□□□ 0.1
USP53-203ENST00000507597 TNCP24821 2201 aa15.68■□□□□ 0.1
USP53-203ENST00000507597 NUDT19A8MXV4 375 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 CCSO14618 274 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 ID3Q02535 119 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 ATP5G2Q06055 141 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 SPINK9Q5DT21 86 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 C10orf99Q6UWK7 81 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 OR4D5Q8NGN0 318 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 OR10C1Q96KK4 312 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 CXorf58Q96LI9 332 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 CITED2Q99967 270 aaPredicted RBP15.67■□□□□ 0.1
USP53-203ENST00000507597 PLXNB1O43157 2135 aa15.67■□□□□ 0.1
USP53-203ENST00000507597 TRBV9A0A0B4J1U6 114 aa15.66■□□□□ 0.1
USP53-203ENST00000507597 NXPH3O95157 252 aa15.66■□□□□ 0.1
USP53-203ENST00000507597 SCGB1D2O95969 90 aa15.66■□□□□ 0.1
USP53-203ENST00000507597 IFNA10P01566 189 aa15.66■□□□□ 0.1
USP53-203ENST00000507597 RLN2P04090 185 aa15.66■□□□□ 0.1
USP53-203ENST00000507597 RPLP1P05386 114 aaKnown RBP15.66■□□□□ 0.1
USP53-203ENST00000507597 PVALBP20472 110 aaPredicted RBP15.66■□□□□ 0.1
USP53-203ENST00000507597 RPL23AP62750 156 aaKnown RBP15.66■□□□□ 0.1
USP53-203ENST00000507597 KLK9Q2XQG4 91 aa15.66■□□□□ 0.1
USP53-203ENST00000507597 MGAT4CQ9UBM8 478 aa15.66■□□□□ 0.1
USP53-203ENST00000507597 FBXL7Q9UJT9 491 aa15.66■□□□□ 0.1
USP53-203ENST00000507597 KLK9Q9UKQ9 250 aa15.66■□□□□ 0.1
USP53-203ENST00000507597 FBN1P35555 2871 aaKnown RBP15.66■□□□□ 0.1
USP53-203ENST00000507597 MPTX1A8MV57 137 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 M0QZ24 198 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 RAB11AP62491 216 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 RHOGP84095 191 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 EXOSC2Q13868 293 aaKnown RBP15.65■□□□□ 0.1
USP53-203ENST00000507597 C2orf68Q2NKX9 166 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 ZNF491Q8N8L2 437 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 SLC24A4Q8NFF2 622 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 ASB13Q8WXK3 278 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 RAB40CQ96S21 281 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 P2RX4Q99571 388 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 NMES1Q9C002 83 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 KLK15Q9H2R5 256 aa15.65■□□□□ 0.1
USP53-203ENST00000507597 IGLV11-55A0A075B6I3 123 aa15.64■□□□□ 0.09
USP53-203ENST00000507597 L7N2F9 121 aa15.64■□□□□ 0.09
USP53-203ENST00000507597 OR2J3O76001 311 aa15.64■□□□□ 0.09
USP53-203ENST00000507597 KRTAP10-3P60369 221 aa15.64■□□□□ 0.09
USP53-203ENST00000507597 VAMP2P63027 116 aa15.64■□□□□ 0.09
USP53-203ENST00000507597 OR4F17Q8NGA8 305 aa15.64■□□□□ 0.09
USP53-203ENST00000507597 MYOZ3Q8TDC0 251 aa15.64■□□□□ 0.09
USP53-203ENST00000507597 EEF1AKMT3Q96AZ1 226 aa15.64■□□□□ 0.09
USP53-203ENST00000507597 OR4F4Q96R69 305 aa15.64■□□□□ 0.09
USP53-203ENST00000507597 RPS10-NUDT3A0A1W2PQS6 291 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 PET100P0DJ07 73 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 NPY1RP25929 384 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 TAS2R30P59541 319 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 NSUN5P1Q3KNT7 163 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 C2orf83Q53S99 150 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 TCTEX1D4Q5JR98 221 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 ETFRF1Q6IPR1 90 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 KLHL30-AS1Q8NEE0 82 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 RNASEH2CQ8TDP1 164 aaKnown RBP15.63■□□□□ 0.09
USP53-203ENST00000507597 VN1R17PQ8TDU5 208 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 C4orf3Q8WVX3 66 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 FANCD2OSQ96PS1 177 aa15.63■□□□□ 0.09
USP53-203ENST00000507597 GAR1Q9NY12 217 aaKnown RBP15.63■□□□□ 0.09
USP53-203ENST00000507597 TRBV7-1A0A0A6YYK4 115 aa15.62■□□□□ 0.09
USP53-203ENST00000507597 SCGB2A1O75556 95 aa15.62■□□□□ 0.09
USP53-203ENST00000507597 SCAF4O95104 1147 aaKnown RBP15.62■□□□□ 0.09
USP53-203ENST00000507597 PRH1P02810 166 aa15.62■□□□□ 0.09
USP53-203ENST00000507597 RRAS2P62070 204 aaPredicted RBP15.62■□□□□ 0.09
USP53-203ENST00000507597 POLR2GP62487 172 aaKnown RBP eCLIP15.62■□□□□ 0.09
USP53-203ENST00000507597 C15orf32Q32M92 178 aa15.62■□□□□ 0.09
USP53-203ENST00000507597 MISP3Q96FF7 219 aa15.62■□□□□ 0.09
USP53-203ENST00000507597 ATP6V0BQ99437 205 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms