RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SNRPD2P62316 118 aaKnown RBP1.01□□□□□ -2.25
LSM6-205ENST00000507449 ZNF345Q14585 488 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 DCXRQ7Z4W1 244 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 C20orf196Q8IYI0 205 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 OR52E6Q96RD3 313 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 RETNLBQ9BQ08 111 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 CYSTM1Q9H1C7 97 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 FBXL12Q9NXK8 326 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 VPS29Q9UBQ0 182 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 FBN3Q75N90 2809 aa1.01□□□□□ -2.25
LSM6-205ENST00000507449 GLI3P10071 1580 aa1□□□□□ -2.25
LSM6-205ENST00000507449 SDK1Q7Z5N4 2213 aa1□□□□□ -2.25
LSM6-205ENST00000507449 PLB1Q6P1J6 1458 aa1□□□□□ -2.25
LSM6-205ENST00000507449 ZFYVE9O95405 1425 aa1□□□□□ -2.25
LSM6-205ENST00000507449 FCGBPQ9Y6R7 5405 aaPredicted RBP1□□□□□ -2.25
LSM6-205ENST00000507449 CLDN24A6NM45 220 aa1□□□□□ -2.25
LSM6-205ENST00000507449 PSMD12O00232 456 aaPredicted RBP1□□□□□ -2.25
LSM6-205ENST00000507449 KPNA3O00505 521 aaPredicted RBP1□□□□□ -2.25
LSM6-205ENST00000507449 SHBGP04278 402 aa1□□□□□ -2.25
LSM6-205ENST00000507449 RPS17P08708 135 aaKnown RBP1□□□□□ -2.25
LSM6-205ENST00000507449 RPSAP08865 295 aaKnown RBP1□□□□□ -2.25
LSM6-205ENST00000507449 CD79AP11912 226 aa1□□□□□ -2.25
LSM6-205ENST00000507449 HIST1H2BOP23527 126 aa1□□□□□ -2.25
LSM6-205ENST00000507449 HIST1H2BBP33778 126 aa1□□□□□ -2.25
LSM6-205ENST00000507449 EIF2B2P49770 351 aaKnown RBP1□□□□□ -2.25
LSM6-205ENST00000507449 HIST1H2BDP58876 126 aa1□□□□□ -2.25
LSM6-205ENST00000507449 PSME3P61289 254 aa1□□□□□ -2.25
LSM6-205ENST00000507449 LSM6P62312 80 aaKnown RBP1□□□□□ -2.25
LSM6-205ENST00000507449 HIST1H2BCP62807 126 aa1□□□□□ -2.25
LSM6-205ENST00000507449 RANP62826 216 aaKnown RBP1□□□□□ -2.25
LSM6-205ENST00000507449 HBA1P69905 142 aa1□□□□□ -2.25
LSM6-205ENST00000507449 ELOBQ15370 118 aa1□□□□□ -2.25
LSM6-205ENST00000507449 HIST2H2BEQ16778 126 aa1□□□□□ -2.25
LSM6-205ENST00000507449 HIST2H2BFQ5QNW6 126 aaPredicted RBP1□□□□□ -2.25
LSM6-205ENST00000507449 Q8N2B8 174 aa1□□□□□ -2.25
LSM6-205ENST00000507449 LRRC25Q8N386 305 aaPredicted RBP1□□□□□ -2.25
LSM6-205ENST00000507449 CLDN22Q8N7P3 220 aa1□□□□□ -2.25
LSM6-205ENST00000507449 RASSF5Q8WWW0 418 aa1□□□□□ -2.25
LSM6-205ENST00000507449 HIST1H2BHQ93079 126 aa1□□□□□ -2.25
LSM6-205ENST00000507449 C8orf76Q96K31 380 aa1□□□□□ -2.25
LSM6-205ENST00000507449 TSPAN32Q96QS1 320 aa1□□□□□ -2.25
LSM6-205ENST00000507449 HIST1H2BNQ99877 126 aa1□□□□□ -2.25
LSM6-205ENST00000507449 HIST1H2BMQ99879 126 aa1□□□□□ -2.25
LSM6-205ENST00000507449 NIPSNAP1Q9BPW8 284 aa1□□□□□ -2.25
LSM6-205ENST00000507449 C11orf68Q9H3H3 251 aaKnown RBP1□□□□□ -2.25
LSM6-205ENST00000507449 UBAP1Q9NZ09 502 aa1□□□□□ -2.25
LSM6-205ENST00000507449 RP1L1Q8IWN7 2480 aaPredicted RBP1□□□□□ -2.25
LSM6-205ENST00000507449 HECW2Q9P2P5 1572 aa1□□□□□ -2.25
LSM6-205ENST00000507449 GREB1Q4ZG55 1949 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 SETD5Q9C0A6 1442 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 RALGAPA2Q2PPJ7 1873 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 MAST2Q6P0Q8 1798 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 MYO3BQ8WXR4 1341 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 A0A087WUJ7 227 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 OR4C46A6NHA9 309 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 F8W036 122 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 MRPS14O60783 128 aaKnown RBP0.99□□□□□ -2.25
LSM6-205ENST00000507449 TCRBP04435 133 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 NFYAP23511 347 aaPredicted RBP0.99□□□□□ -2.25
LSM6-205ENST00000507449 RUNX1Q01196 453 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 LPCAT3Q6P1A2 487 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 RPL22L1Q6P5R6 122 aaKnown RBP0.99□□□□□ -2.25
LSM6-205ENST00000507449 UNQ6190/PRO20217Q6UXQ8 127 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 ANKRD29Q8N6D5 301 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 OR13C4Q8NGS5 318 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 PFN4Q8NHR9 129 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 C11orf40Q8WZ69 217 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 CCDC42Q96M95 316 aa0.99□□□□□ -2.25
LSM6-205ENST00000507449 KMT2BQ9UMN6 2715 aaPredicted RBP0.98□□□□□ -2.25
LSM6-205ENST00000507449 TTC21AQ8NDW8 1320 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 FAM236DA0A1B0GTK5 79 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 SMIM23A6NLE4 172 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 BUB1B-PAK6H3BSN5 160 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 SDCBPO00560 298 aaPredicted RBP0.98□□□□□ -2.25
LSM6-205ENST00000507449 PMP2P02689 132 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 TTRP02766 147 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 UBBP0CG47 229 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 FAM236CP0DP71 79 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 AESQ08117 197 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 ZNF846Q147U1 533 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 LCN15Q6UWW0 184 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 TRAPPC5Q8IUR0 188 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 TERB2Q8NHR7 220 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 H1FXQ92522 213 aaKnown RBP0.98□□□□□ -2.25
LSM6-205ENST00000507449 ADAT1Q9BUB4 502 aaKnown RBP0.98□□□□□ -2.25
LSM6-205ENST00000507449 PRTFDC1Q9NRG1 225 aa0.98□□□□□ -2.25
LSM6-205ENST00000507449 NUP155O75694 1391 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 ROBO3Q96MS0 1386 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 HECW1Q76N89 1606 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 TRAV26-2A0A0B4J265 109 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 EXOC1LA0A1B0GW35 172 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 PQLC2LA1A4F0 135 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 SMIM9A6NGZ8 99 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 TMEM212A6NML5 194 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 GOLGA6L19H0YKK7 550 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 CNIH1O95406 144 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 ANGP03950 147 aaKnown RBP0.97□□□□□ -2.25
LSM6-205ENST00000507449 CTSDP07339 412 aaPredicted RBP0.97□□□□□ -2.25
LSM6-205ENST00000507449 METTL15P1P0C7V9 234 aa0.97□□□□□ -2.25
LSM6-205ENST00000507449 CRYGAP11844 174 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms