RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 FAM209BQ5JX69 171 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 PVRIGQ6DKI7 326 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 C18orf65Q6ZTR6 163 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 OR2C3Q8N628 320 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 KLHL30-AS1Q8NEE0 82 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 WFDC9Q8NEX5 89 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 OR1P1Q8NH06 330 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 COQ8AQ8NI60 647 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 ZNF431Q8TF32 576 aaPredicted RBP7.54□□□□□ -1.2
SFXN1-205ENST00000506963 CASTOR1Q8WTX7 329 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 P2RX4Q99571 388 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 MARVELD1Q9BSK0 173 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 PDCD10Q9BUL8 212 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 GNB4Q9HAV0 340 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 F11RQ9Y624 299 aaKnown RBP7.54□□□□□ -1.2
SFXN1-205ENST00000506963 A0A1W2PRX2 142 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 FAM90A26D6RGX4 464 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 CYB5BO43169 146 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 PRAF2O60831 178 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 RBMXL2O75526 392 aaKnown RBP7.53□□□□□ -1.2
SFXN1-205ENST00000506963 PTTG1O95997 202 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 RHOGP84095 191 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 BSXQ3C1V8 233 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 ZNF343Q6P1L6 599 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 PLET1Q6UQ28 207 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 C8orf86Q6ZUL3 223 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 RAX2Q96IS3 184 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 MS4A10Q96PG2 267 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 ATP6V0BQ99437 205 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 PLEKHA3Q9HB20 300 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 ZNF355PQ9NSJ1 428 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 THYN1Q9P016 225 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 HSPB7Q9UBY9 170 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 DMRT1Q9Y5R6 373 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 PKD1L1Q8TDX9 2849 aa7.53□□□□□ -1.2
SFXN1-205ENST00000506963 C13orf42A0A1B0GVH6 325 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 SNRPGP15A8MWD9 76 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 NUDT19A8MXV4 375 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 CCL24O00175 119 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 IFNA17P01571 189 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 PRH1P02810 166 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 DEFA4P12838 97 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 MFAP2P55001 183 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 ERHP84090 104 aaKnown RBP7.52□□□□□ -1.21
SFXN1-205ENST00000506963 ATP5G2Q06055 141 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 TNFRSF9Q07011 255 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 GGNBP1Q5YKI7 109 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 LINC00482Q8N8I6 264 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 VN1R17PQ8TDU5 208 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 HINT2Q9BX68 163 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 FBXL7Q9UJT9 491 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 TRRAPQ9Y4A5 3859 aa7.52□□□□□ -1.21
SFXN1-205ENST00000506963 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.51□□□□□ -1.21
SFXN1-205ENST00000506963 INMT-MINDY4F8WBC2 141 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 OR2J3O76001 311 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 NDUFB8O95169 186 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 IFNA21P01568 189 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 HSPB1P04792 205 aaKnown RBP7.51□□□□□ -1.21
SFXN1-205ENST00000506963 REG1AP05451 166 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 HOXB5P09067 269 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 ATP5IP56385 69 aaPredicted RBP7.51□□□□□ -1.21
SFXN1-205ENST00000506963 ID3Q02535 119 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 DCTN2Q13561 401 aaKnown RBP7.51□□□□□ -1.21
SFXN1-205ENST00000506963 C15orf32Q32M92 178 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 C19orf35Q6ZS72 473 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 OR11H1Q8NG94 326 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 OR52B4Q8NGK2 314 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 OR1N2Q8NGR9 330 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 CXorf58Q96LI9 332 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 SEC22CQ9BRL7 303 aa7.51□□□□□ -1.21
SFXN1-205ENST00000506963 RANGRFQ9HD47 186 aaPredicted RBP7.51□□□□□ -1.21
SFXN1-205ENST00000506963 TRBV7-1A0A0A6YYK4 115 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 CORTO00230 105 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 ADAP1O75689 374 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 LY86O95711 162 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 IGHV3-11P01762 117 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 PF4P02776 101 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 OR8U8P0C7N1 319 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 RNASE2P10153 161 aaKnown RBP7.5□□□□□ -1.21
SFXN1-205ENST00000506963 FCGR2BP31994 310 aaPredicted RBP7.5□□□□□ -1.21
SFXN1-205ENST00000506963 SNCAP37840 140 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 HTR2BP41595 481 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 HOXA1P49639 335 aaPredicted RBP7.5□□□□□ -1.21
SFXN1-205ENST00000506963 SUB1P53999 127 aaKnown RBP eCLIP7.5□□□□□ -1.21
SFXN1-205ENST00000506963 ZNF616Q08AN1 781 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 EXOSC2Q13868 293 aaKnown RBP7.5□□□□□ -1.21
SFXN1-205ENST00000506963 C12orf45Q8N5I9 185 aaPredicted RBP7.5□□□□□ -1.21
SFXN1-205ENST00000506963 OR4D5Q8NGN0 318 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 OR1S1Q8NH92 325 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 GPN1Q9HCN4 374 aaPredicted RBP7.5□□□□□ -1.21
SFXN1-205ENST00000506963 ENY2Q9NPA8 101 aa7.5□□□□□ -1.21
SFXN1-205ENST00000506963 PEF1Q9UBV8 284 aaKnown RBP7.5□□□□□ -1.21
SFXN1-205ENST00000506963 NBEAL1Q6ZS30 2694 aa7.49□□□□□ -1.21
SFXN1-205ENST00000506963 IGHV4OR15-8A0A075B7B6 117 aa7.49□□□□□ -1.21
SFXN1-205ENST00000506963 A0A087WW49 117 aa7.49□□□□□ -1.21
SFXN1-205ENST00000506963 C7orf66A4D0T2 115 aa7.49□□□□□ -1.21
SFXN1-205ENST00000506963 MPTX1A8MV57 137 aa7.49□□□□□ -1.21
SFXN1-205ENST00000506963 LINC01619G3V211 115 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms