RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 NEDD8Q15843 81 aa8.4□□□□□ -1.06
SIL1-208ENST00000505945 APRG1Q8IVJ8 170 aa8.4□□□□□ -1.06
SIL1-208ENST00000505945 TSPAN14Q8NG11 270 aa8.4□□□□□ -1.06
SIL1-208ENST00000505945 MOB3AQ96BX8 217 aa8.4□□□□□ -1.06
SIL1-208ENST00000505945 DGCR14Q96DF8 476 aaKnown RBP8.4□□□□□ -1.06
SIL1-208ENST00000505945 S100A16Q96FQ6 103 aaKnown RBP8.4□□□□□ -1.06
SIL1-208ENST00000505945 RNF2Q99496 336 aa8.4□□□□□ -1.06
SIL1-208ENST00000505945 MAP6D1Q9H9H5 199 aa8.4□□□□□ -1.06
SIL1-208ENST00000505945 SMPXQ9UHP9 88 aa8.4□□□□□ -1.06
SIL1-208ENST00000505945 DBX1A6NMT0 343 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 C15orf62A8K5M9 175 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 FCGR2BP31994 310 aaPredicted RBP8.39□□□□□ -1.07
SIL1-208ENST00000505945 TGFBR1P36897 503 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 TFPI2P48307 235 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 ZNF124Q15973 351 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 CMTM1Q8IZ96 169 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 GALNT14Q96FL9 552 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 ZNF414Q96IQ9 312 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 ATP6V0BQ99437 205 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 Q9H521 79 aa8.39□□□□□ -1.07
SIL1-208ENST00000505945 KLK5Q9Y337 293 aaPredicted RBP8.39□□□□□ -1.07
SIL1-208ENST00000505945 IGKV3-7A0A075B6H7 116 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 CHEK1O14757 476 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 YIF1AO95070 293 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 ATP6V1G2O95670 118 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 ATF4P18848 351 aaPredicted RBP8.38□□□□□ -1.07
SIL1-208ENST00000505945 PHLDA2Q53GA4 152 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 LYSMD2Q8IV50 215 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 CADM3Q8N126 398 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 RPP25LQ8N5L8 163 aaKnown RBP8.38□□□□□ -1.07
SIL1-208ENST00000505945 TMEM217Q8N7C4 229 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 OR5H2Q8NGV7 314 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 OR6F1Q8NGZ6 308 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 PHLDA1Q8WV24 401 aaPredicted RBP8.38□□□□□ -1.07
SIL1-208ENST00000505945 SLC25A46Q96AG3 418 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 MISP3Q96FF7 219 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 TMEM56Q96MV1 263 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 RHPN1-AS1Q9BWJ2 59 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 FKBP11Q9NYL4 201 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 PRNDQ9UKY0 176 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 ANAPC10Q9UM13 185 aa8.38□□□□□ -1.07
SIL1-208ENST00000505945 IGHV3OR16-13A0A075B7E8 117 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 IGHV3-74A0A0B4J1X5 117 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 IGHV7-4-1A0A0J9YVY3 117 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 GPR31O00270 319 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 NUPL2O15504 423 aaKnown RBP8.37□□□□□ -1.07
SIL1-208ENST00000505945 TMEM127O75204 238 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 IGHV3-48P01763 117 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 NAT1P18440 290 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 HLA-DMAP28067 261 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 RPS19P39019 145 aaKnown RBP8.37□□□□□ -1.07
SIL1-208ENST00000505945 TAS2R46P59540 309 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 TAS2R20P59543 309 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 UBE2NLQ5JXB2 153 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 TMEM69Q5SWH9 247 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 GBGT1Q8N5D6 347 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 SAMD12Q8N8I0 201 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 TMEM116Q8NCL8 245 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 OR1P1Q8NH06 330 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 C6orf62Q9GZU0 229 aaPredicted RBP8.37□□□□□ -1.07
SIL1-208ENST00000505945 FXYD6Q9H0Q3 95 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 CSTL1Q9H114 145 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 TMEM14BQ9NUH8 114 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 FRAS1Q86XX4 4008 aa8.37□□□□□ -1.07
SIL1-208ENST00000505945 TRAV14DV4A0A0A6YYC5 116 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 C15orf61A6NNL5 157 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 MPTX1A8MV57 137 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 I3L2K1 104 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 DEDDO75618 318 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 PRSS3P35030 304 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 HRH1P35367 487 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 MFAP4P55083 255 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 RELQ04864 619 aaPredicted RBP8.36□□□□□ -1.07
SIL1-208ENST00000505945 CROCCP3Q8IVE0 287 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 OR10C1Q96KK4 312 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 TSC22D3Q99576 134 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 RARRES2Q99969 163 aa8.36□□□□□ -1.07
SIL1-208ENST00000505945 MT-CO2P00403 227 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 CMC4P56277 68 aaPredicted RBP8.35□□□□□ -1.07
SIL1-208ENST00000505945 TSPAN5P62079 268 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 LSM3P62310 102 aaKnown RBP8.35□□□□□ -1.07
SIL1-208ENST00000505945 FAM90A2PQ658T7 463 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 H2BFWTQ7Z2G1 175 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 TBC1D26Q86UD7 250 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 OR4A16Q8NH70 328 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 PINX1Q96BK5 328 aaKnown RBP8.35□□□□□ -1.07
SIL1-208ENST00000505945 SEC22AQ96IW7 307 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 CMTM3Q96MX0 182 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 TXN2Q99757 166 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 NXF2Q9GZY0 626 aaKnown RBP8.35□□□□□ -1.07
SIL1-208ENST00000505945 KMT2AQ03164 3969 aa8.35□□□□□ -1.07
SIL1-208ENST00000505945 GNG7O60262 68 aa8.34□□□□□ -1.07
SIL1-208ENST00000505945 IGKV1-39P01597 117 aa8.34□□□□□ -1.07
SIL1-208ENST00000505945 APOHP02749 345 aaPredicted RBP8.34□□□□□ -1.07
SIL1-208ENST00000505945 IGKV1D-39P04432 117 aa8.34□□□□□ -1.07
SIL1-208ENST00000505945 S100GP29377 79 aa8.34□□□□□ -1.07
SIL1-208ENST00000505945 NANOS2P60321 138 aaKnown RBP8.34□□□□□ -1.07
SIL1-208ENST00000505945 PRCDQ00LT1 54 aa8.34□□□□□ -1.07
SIL1-208ENST00000505945 IZUMO4Q1ZYL8 232 aa8.34□□□□□ -1.07
SIL1-208ENST00000505945 LGALS9CQ6DKI2 356 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms