RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 VCX3AQ9NNX9 186 aa18.37■□□□□ 0.53
HERC4-212ENST00000505760 TSPAN5P62079 268 aa18.36■□□□□ 0.53
HERC4-212ENST00000505760 PHLDA2Q53GA4 152 aa18.36■□□□□ 0.53
HERC4-212ENST00000505760 TSC22D3Q99576 134 aa18.36■□□□□ 0.53
HERC4-212ENST00000505760 K7EIM0 57 aa18.35■□□□□ 0.53
HERC4-212ENST00000505760 ZNF207O43670 478 aaKnown RBP18.35■□□□□ 0.53
HERC4-212ENST00000505760 Q6ZWC4 215 aa18.35■□□□□ 0.53
HERC4-212ENST00000505760 LYSMD2Q8IV50 215 aa18.35■□□□□ 0.53
HERC4-212ENST00000505760 YIPF6Q96EC8 236 aa18.35■□□□□ 0.53
HERC4-212ENST00000505760 TMEM14BQ9NUH8 114 aa18.35■□□□□ 0.53
HERC4-212ENST00000505760 TP53TG1Q9Y2A0 90 aa18.35■□□□□ 0.53
HERC4-212ENST00000505760 CXorf65A6NEN9 183 aa18.34■□□□□ 0.53
HERC4-212ENST00000505760 OR4C46A6NHA9 309 aa18.34■□□□□ 0.53
HERC4-212ENST00000505760 F8W735 103 aaPredicted RBP18.34■□□□□ 0.53
HERC4-212ENST00000505760 K7EMT4 169 aa18.34■□□□□ 0.53
HERC4-212ENST00000505760 SPRY2O43597 315 aa18.34■□□□□ 0.53
HERC4-212ENST00000505760 ADMP35318 185 aa18.34■□□□□ 0.53
HERC4-212ENST00000505760 LPCAT3Q6P1A2 487 aa18.34■□□□□ 0.53
HERC4-212ENST00000505760 A0A0J9YWU9 116 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 SMIM31A0A1B0GVY4 71 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 C15orf61A6NNL5 157 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 UBE2CO00762 179 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 BMI1P35226 326 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 PMS2P11Q13670 270 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 DEFB135Q30KP9 77 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 ODF3L2Q3SX64 289 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 WFDC3Q8IUB2 231 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 OR1P1Q8NH06 330 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 SLC25A46Q96AG3 418 aa18.33■□□□□ 0.52
HERC4-212ENST00000505760 A0A087WXM4 84 aa18.32■□□□□ 0.52
HERC4-212ENST00000505760 DBX1A6NMT0 343 aa18.32■□□□□ 0.52
HERC4-212ENST00000505760 C15orf62A8K5M9 175 aa18.32■□□□□ 0.52
HERC4-212ENST00000505760 EIF4EP06730 217 aaKnown RBP18.32■□□□□ 0.52
HERC4-212ENST00000505760 RELQ04864 619 aaPredicted RBP18.32■□□□□ 0.52
HERC4-212ENST00000505760 TBC1D26Q86UD7 250 aa18.32■□□□□ 0.52
HERC4-212ENST00000505760 STPG3Q8N7X2 389 aa18.32■□□□□ 0.52
HERC4-212ENST00000505760 OR4A16Q8NH70 328 aa18.32■□□□□ 0.52
HERC4-212ENST00000505760 GPX8Q8TED1 209 aa18.32■□□□□ 0.52
HERC4-212ENST00000505760 FAM212BQ9NTI7 297 aaPredicted RBP18.32■□□□□ 0.52
HERC4-212ENST00000505760 COMMD3Q9UBI1 195 aa18.32■□□□□ 0.52
HERC4-212ENST00000505760 NUPL2O15504 423 aaKnown RBP18.31■□□□□ 0.52
HERC4-212ENST00000505760 CTSDP07339 412 aaPredicted RBP18.31■□□□□ 0.52
HERC4-212ENST00000505760 CTSGP08311 255 aa18.31■□□□□ 0.52
HERC4-212ENST00000505760 TNFRSF9Q07011 255 aa18.31■□□□□ 0.52
HERC4-212ENST00000505760 H2BFWTQ7Z2G1 175 aa18.31■□□□□ 0.52
HERC4-212ENST00000505760 LYG2Q86SG7 212 aa18.31■□□□□ 0.52
HERC4-212ENST00000505760 MISP3Q96FF7 219 aa18.31■□□□□ 0.52
HERC4-212ENST00000505760 KIR2DL5BA0A0G2JN68 375 aa18.3■□□□□ 0.52
HERC4-212ENST00000505760 KIR2DL5BA0A0G2JPC4 375 aa18.3■□□□□ 0.52
HERC4-212ENST00000505760 RPL35AP18077 110 aaKnown RBP18.3■□□□□ 0.52
HERC4-212ENST00000505760 SNX29P2Q8IUI4 249 aa18.3■□□□□ 0.52
HERC4-212ENST00000505760 KIR2DL5AQ8N109 375 aa18.3■□□□□ 0.52
HERC4-212ENST00000505760 KIR2DL5BQ8NHK3 375 aa18.3■□□□□ 0.52
HERC4-212ENST00000505760 SCPEP1Q9HB40 452 aa18.3■□□□□ 0.52
HERC4-212ENST00000505760 SMPXQ9UHP9 88 aa18.3■□□□□ 0.52
HERC4-212ENST00000505760 YIF1AO95070 293 aa18.29■□□□□ 0.52
HERC4-212ENST00000505760 APOA1P02647 267 aa18.29■□□□□ 0.52
HERC4-212ENST00000505760 MFAP4P55083 255 aa18.29■□□□□ 0.52
HERC4-212ENST00000505760 GALNT14Q96FL9 552 aa18.29■□□□□ 0.52
HERC4-212ENST00000505760 SEC22AQ96IW7 307 aa18.29■□□□□ 0.52
HERC4-212ENST00000505760 NUPR2A6NF83 97 aa18.28■□□□□ 0.52
HERC4-212ENST00000505760 RCVRNP35243 200 aa18.28■□□□□ 0.52
HERC4-212ENST00000505760 TMEM116Q8NCL8 245 aa18.28■□□□□ 0.52
HERC4-212ENST00000505760 LINC00476Q8WZB0 136 aa18.28■□□□□ 0.52
HERC4-212ENST00000505760 CMTM3Q96MX0 182 aa18.28■□□□□ 0.52
HERC4-212ENST00000505760 RNF2Q99496 336 aa18.28■□□□□ 0.52
HERC4-212ENST00000505760 C6orf62Q9GZU0 229 aaPredicted RBP18.28■□□□□ 0.52
HERC4-212ENST00000505760 IGHV7-4-1A0A0J9YVY3 117 aa18.27■□□□□ 0.52
HERC4-212ENST00000505760 I3L2K1 104 aa18.27■□□□□ 0.52
HERC4-212ENST00000505760 TNFAIP8O95379 198 aa18.27■□□□□ 0.52
HERC4-212ENST00000505760 UCP3P55916 312 aa18.27■□□□□ 0.52
HERC4-212ENST00000505760 PRCDQ00LT1 54 aa18.27■□□□□ 0.52
HERC4-212ENST00000505760 EWSR1Q01844 656 aaKnown RBP eCLIP18.27■□□□□ 0.521e-10■□□□□ 9
HERC4-212ENST00000505760 MRGPRFQ96AM1 343 aa18.27■□□□□ 0.52
HERC4-212ENST00000505760 RNF183Q96D59 192 aa18.27■□□□□ 0.52
HERC4-212ENST00000505760 TXN2Q99757 166 aa18.27■□□□□ 0.52
HERC4-212ENST00000505760 RHPN1-AS1Q9BWJ2 59 aa18.27■□□□□ 0.52
HERC4-212ENST00000505760 IGHV3-49A0A0A0MS15 119 aa18.26■□□□□ 0.51
HERC4-212ENST00000505760 CHEK1O14757 476 aa18.26■□□□□ 0.51
HERC4-212ENST00000505760 MT-CO2P00403 227 aa18.26■□□□□ 0.51
HERC4-212ENST00000505760 IGKV1-39P01597 117 aa18.26■□□□□ 0.51
HERC4-212ENST00000505760 IGKV1D-39P04432 117 aa18.26■□□□□ 0.51
HERC4-212ENST00000505760 NCS1P62166 190 aa18.26■□□□□ 0.51
HERC4-212ENST00000505760 ZNF114Q8NC26 417 aa18.26■□□□□ 0.51
HERC4-212ENST00000505760 PINX1Q96BK5 328 aaKnown RBP18.26■□□□□ 0.51
HERC4-212ENST00000505760 GNG7O60262 68 aa18.25■□□□□ 0.51
HERC4-212ENST00000505760 LY6G6CO95867 125 aa18.25■□□□□ 0.51
HERC4-212ENST00000505760 IGHV3-48P01763 117 aa18.25■□□□□ 0.51
HERC4-212ENST00000505760 FCGR2BP31994 310 aaPredicted RBP18.25■□□□□ 0.51
HERC4-212ENST00000505760 TFPI2P48307 235 aa18.25■□□□□ 0.51
HERC4-212ENST00000505760 HSPE1P61604 102 aaKnown RBP18.25■□□□□ 0.51
HERC4-212ENST00000505760 ERHP84090 104 aaKnown RBP18.25■□□□□ 0.51
HERC4-212ENST00000505760 APRG1Q8IVJ8 170 aa18.25■□□□□ 0.51
HERC4-212ENST00000505760 OR10C1Q96KK4 312 aa18.25■□□□□ 0.51
HERC4-212ENST00000505760 NXF2Q9GZY0 626 aaKnown RBP18.25■□□□□ 0.51
HERC4-212ENST00000505760 MAP6D1Q9H9H5 199 aa18.25■□□□□ 0.51
HERC4-212ENST00000505760 IGKV3-7A0A075B6H7 116 aa18.24■□□□□ 0.51
HERC4-212ENST00000505760 TRAV14DV4A0A0A6YYC5 116 aa18.24■□□□□ 0.51
HERC4-212ENST00000505760 ELK1P19419 428 aa18.24■□□□□ 0.51
HERC4-212ENST00000505760 CMC4P56277 68 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms