RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 C21orf62Q9NYP8 219 aa11.93□□□□□ -0.5
PDLIM7-213ENST00000505074 F11RQ9Y624 299 aaKnown RBP11.93□□□□□ -0.5
PDLIM7-213ENST00000505074 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
PDLIM7-213ENST00000505074 ZNF207O43670 478 aaKnown RBP11.92□□□□□ -0.5
PDLIM7-213ENST00000505074 C8orf88P0DMB2 117 aa11.92□□□□□ -0.5
PDLIM7-213ENST00000505074 LAMTOR1Q6IAA8 161 aa11.92□□□□□ -0.5
PDLIM7-213ENST00000505074 TMEM56Q96MV1 263 aa11.92□□□□□ -0.5
PDLIM7-213ENST00000505074 SPAG8Q99932 426 aaPredicted RBP11.92□□□□□ -0.5
PDLIM7-213ENST00000505074 DAZ1Q9NQZ3 744 aaKnown RBP11.92□□□□□ -0.5
PDLIM7-213ENST00000505074 NDUFA4L2Q9NRX3 87 aa11.92□□□□□ -0.5
PDLIM7-213ENST00000505074 MUC4Q99102 2169 aa11.92□□□□□ -0.5
PDLIM7-213ENST00000505074 SMIM31A0A1B0GVY4 71 aa11.91□□□□□ -0.5
PDLIM7-213ENST00000505074 APOC4P55056 127 aa11.91□□□□□ -0.5
PDLIM7-213ENST00000505074 SPSB3Q6PJ21 355 aa11.91□□□□□ -0.5
PDLIM7-213ENST00000505074 C5orf66Q9H5L9 145 aa11.91□□□□□ -0.5
PDLIM7-213ENST00000505074 FKBP11Q9NYL4 201 aa11.91□□□□□ -0.5
PDLIM7-213ENST00000505074 COMMD3Q9UBI1 195 aa11.91□□□□□ -0.5
PDLIM7-213ENST00000505074 PRNDQ9UKY0 176 aa11.91□□□□□ -0.5
PDLIM7-213ENST00000505074 ANAPC10Q9UM13 185 aa11.91□□□□□ -0.5
PDLIM7-213ENST00000505074 NDUFA4O00483 81 aa11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 EIF4EP06730 217 aaKnown RBP11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 MFAP2P55001 183 aa11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 EWSR1Q01844 656 aaKnown RBP eCLIP11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 SNX29P2Q8IUI4 249 aa11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 SCARB1Q8WTV0 552 aa11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 YIPF6Q96EC8 236 aa11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 MISP3Q96FF7 219 aa11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 TSC22D3Q99576 134 aa11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 CHRDL1Q9BU40 450 aa11.9□□□□□ -0.5
PDLIM7-213ENST00000505074 A0A087WXM4 84 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 YIF1AO95070 293 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 MED14OSP0DP75 135 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 NAT1P18440 290 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 DEFB135Q30KP9 77 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 LPCAT3Q6P1A2 487 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 LYG2Q86SG7 212 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 TBC1D26Q86UD7 250 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 OR5B3Q8NH48 314 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 OR4A16Q8NH70 328 aa11.89□□□□□ -0.51
PDLIM7-213ENST00000505074 OR4C46A6NHA9 309 aa11.88□□□□□ -0.51
PDLIM7-213ENST00000505074 C15orf61A6NNL5 157 aa11.88□□□□□ -0.51
PDLIM7-213ENST00000505074 TSPAN4O14817 238 aa11.88□□□□□ -0.51
PDLIM7-213ENST00000505074 RPL35AP18077 110 aaKnown RBP11.88□□□□□ -0.51
PDLIM7-213ENST00000505074 RNASE12Q5GAN4 147 aaKnown RBP11.88□□□□□ -0.51
PDLIM7-213ENST00000505074 H2BFWTQ7Z2G1 175 aa11.88□□□□□ -0.51
PDLIM7-213ENST00000505074 WFDC3Q8IUB2 231 aa11.88□□□□□ -0.51
PDLIM7-213ENST00000505074 SLC25A46Q96AG3 418 aa11.88□□□□□ -0.51
PDLIM7-213ENST00000505074 DBX1A6NMT0 343 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 K7EIM0 57 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 NUPL2O15504 423 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 SPRY2O43597 315 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 TNFAIP8O95379 198 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 CTSDP07339 412 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 ATF4P18848 351 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 RCVRNP35243 200 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 NCS1P62166 190 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 RELQ04864 619 aaPredicted RBP11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 LYSMD2Q8IV50 215 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 STPG3Q8N7X2 389 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 GPX8Q8TED1 209 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 PINX1Q96BK5 328 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 TMEM14BQ9NUH8 114 aa11.87□□□□□ -0.51
PDLIM7-213ENST00000505074 IGKV3-7A0A075B6H7 116 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 IGHV3-49A0A0A0MS15 119 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 BMI1P35226 326 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 ADMP35318 185 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 TFPI2P48307 235 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 ODF3L2Q3SX64 289 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 OR1P1Q8NH06 330 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 PHLDA1Q8WV24 401 aaPredicted RBP11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 ATP6V0BQ99437 205 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 SCPEP1Q9HB40 452 aa11.86□□□□□ -0.51
PDLIM7-213ENST00000505074 C15orf62A8K5M9 175 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 FAM25AB3EWG3 89 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 FAM25CB3EWG5 89 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 FAM25GB3EWG6 89 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 F8W735 103 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 K7EMT4 169 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 M0QYG6 137 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 HPGDSO60760 199 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 IGHV3-48P01763 117 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 APOA1P02647 267 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 PGAM2P15259 253 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 MFAP4P55083 255 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 VBP1P61758 197 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 Q6ZWC4 215 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 CADM3Q8N126 398 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 TMEM217Q8N7C4 229 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 C6orf62Q9GZU0 229 aaPredicted RBP11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 TP53TG1Q9Y2A0 90 aa11.85□□□□□ -0.51
PDLIM7-213ENST00000505074 UBE2CO00762 179 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 GNG7O60262 68 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 MT-CO2P00403 227 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 CTSGP08311 255 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 ERHP84090 104 aaKnown RBP11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 SPINK9Q5DT21 86 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 TMEM116Q8NCL8 245 aa11.84□□□□□ -0.51
PDLIM7-213ENST00000505074 SEC22AQ96IW7 307 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms