RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 MBD2Q9UBB5 411 aa3.86□□□□□ -1.79
DEPDC1B-203ENST00000505017 DUX4Q9UBX2 424 aa3.86□□□□□ -1.79
DEPDC1B-203ENST00000505017 RNF150Q9ULK6 438 aa3.86□□□□□ -1.79
DEPDC1B-203ENST00000505017 SESN1Q9Y6P5 492 aa3.86□□□□□ -1.79
DEPDC1B-203ENST00000505017 A0A087WW49 117 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGHV3-43A0A0B4J1X8 118 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 PPIAL4CA0A0B4J2A2 164 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 RNF222A6NCQ9 220 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 MPTX1A8MV57 137 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 A8MXK9 166 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 K7EPK0 472 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 M0R1X1 148 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 WRBO00258 174 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 TOR1AO14656 332 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 TXNL1O43396 289 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 TNFSF12O43508 249 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 BCL2L11O43521 198 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 FCN3O75636 299 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 HRASP01112 189 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 APOA2P02652 100 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 PRB1P04280 392 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 GAPDHP04406 335 aaKnown RBP3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 P0C879 139 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 PPIAL4GP0DN37 164 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGHV1-8P0DP01 117 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGHV3-43DP0DP04 118 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 COX6B1P14854 86 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 NQO2P16083 231 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 NFYBP25208 207 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 LPAR6P43657 344 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 AP2S1P53680 142 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 PRRX1P54821 245 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 S100A10P60903 97 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 ERVK-16P61578 105 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 GNB2P62879 340 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 RPL30P62888 115 aaKnown RBP3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 IFITM2Q01629 132 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 BAXQ07812 192 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 POU2AF1Q16633 256 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 LTC4SQ16873 150 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 RTL8BQ17RB0 113 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 LRRC37A5PQ49AS3 106 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 AARDQ4LEZ3 155 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 PRAMEF5Q5TYX0 476 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 TEX261Q6UWH6 196 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF833PQ6ZTB9 187 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF383Q8NA42 475 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 OR1S1Q8NH92 325 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 STOML3Q8TAV4 291 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 TMEM186Q96B77 213 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 PHYHIPLQ96FC7 376 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 C5orf30Q96GV9 206 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 CIB3Q96Q77 187 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 RAB40CQ96S21 281 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 CCL19Q99731 98 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF251Q9BRH9 671 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 SLC25A31Q9H0C2 315 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 TMEM133Q9H2Q1 129 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 HEXA-AS1Q9H8Q6 139 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 PLSCR3Q9NRY6 295 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 AMMECR1Q9Y4X0 333 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 WSB1Q9Y6I7 421 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 U3KQ87 197 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 AKAP6Q13023 2319 aa3.85□□□□□ -1.79
DEPDC1B-203ENST00000505017 LRRK2Q5S007 2527 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 LOC105371242A0A075B767 164 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGHV4-61A0A0C4DH41 118 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 LYNX1G3V0Z9 82 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 SLC31A2O15432 143 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 ENSAO43768 121 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 FOXH1O75593 365 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGKV1-39P01597 117 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGKV1-5P01602 117 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGHV2-5P01817 119 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGHV4-59P01825 116 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 IGKV1D-39P04432 117 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 SAA2P0DJI9 122 aaPredicted RBP3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 LYNX1P0DP58 116 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 TPT1P13693 172 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 CCL3L1P16619 93 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 OMGP23515 440 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 PRTN3P24158 256 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 RPL12P30050 165 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 MC5RP33032 325 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 RAB13P51153 203 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 RPL23AP62750 156 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 PDLIM3Q53GG5 364 aaPredicted RBP3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 AVPI1Q5T686 147 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 NCR3LG1Q68D85 454 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 EIF5AL1Q6IS14 154 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 H2BFWTQ7Z2G1 175 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 PDPNQ86YL7 162 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 STPG2Q8N412 459 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 FGFRL1Q8N441 504 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 ZNF680Q8NEM1 530 aa3.84□□□□□ -1.79
DEPDC1B-203ENST00000505017 OR8H1Q8NGG4 311 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms