RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MYOD1P15172 320 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 MRPL54Q6P161 138 aaKnown RBP11.64□□□□□ -0.55
TCOF1-207ENST00000504761 DPPA3Q6W0C5 159 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 FAM169BQ8N8A8 192 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 CORTO00230 105 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 LRRC75BQ2VPJ9 315 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-207ENST00000504761 LRTM2Q8N967 370 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 GRAMD2BQ96HH9 432 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 PGPA6NDG6 321 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 NPIPB11E5RHQ5 1161 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 TIMM23O14925 209 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 STXBP6Q8NFX7 210 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 HSBP1L1C9JCN9 74 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 PAX6P26367 422 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 TFPI2P48307 235 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 Q6ZRM9 215 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 NHLRC2Q8NBF2 726 aa11.64□□□□□ -0.55
TCOF1-207ENST00000504761 ABCA2Q9BZC7 2435 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 CGB1A6NKQ9 187 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 IGLV1-44P01699 117 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 COL8A1P27658 744 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 UPK2O00526 184 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 IL6RP08887 468 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-207ENST00000504761 OR5R1Q8NH85 324 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 IFI27L2Q9H2X8 130 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 RNF24Q9Y225 148 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 MED12LQ86YW9 2145 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 CEACAM4O75871 244 aa11.63□□□□□ -0.55
TCOF1-207ENST00000504761 C8orf88P0DMB2 117 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 NMSQ5H8A3 153 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 PQLC2Q6ZP29 291 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 SRD5A3Q9H8P0 318 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 IL4P05112 153 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 IGHV1-8P0DP01 117 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 CRYBB3P26998 211 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 MFAP4P55083 255 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 HTN1P15515 57 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 SRSF7Q16629 238 aaKnown RBP eCLIP11.62□□□□□ -0.55
TCOF1-207ENST00000504761 RNF212Q495C1 297 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 FGF23Q9GZV9 251 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-207ENST00000504761 C15orf61A6NNL5 157 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 PRNTQ86SH4 94 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 SGMS2Q8NHU3 365 aa11.62□□□□□ -0.55
TCOF1-207ENST00000504761 TLN2Q9Y4G6 2542 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 PPP1R27Q86WC6 154 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 SLX1AQ9BQ83 275 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 PSMG3Q9BT73 122 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-207ENST00000504761 AUP1Q9Y679 476 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 MYO9AB2RTY4 2548 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 IGHV2-26A0A0B4J1V2 119 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 UQCRFS1P47985 274 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 ZNF137PP52743 207 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 FAM3BP58499 235 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-207ENST00000504761 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 LINC00527Q9UJ94 153 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 TRBV6-6A0A0A6YYG2 114 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 ZNF207O43670 478 aaKnown RBP11.61□□□□□ -0.55
TCOF1-207ENST00000504761 RAB5AP20339 215 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 SRSF3P84103 164 aaKnown RBP11.61□□□□□ -0.55
TCOF1-207ENST00000504761 OR51G1Q8NGK1 321 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 SRSF12Q8WXF0 261 aaKnown RBP11.61□□□□□ -0.55
TCOF1-207ENST00000504761 PITPNC1Q9UKF7 332 aa11.61□□□□□ -0.55
TCOF1-207ENST00000504761 TSTD3H0UI37 97 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 RPEL1Q2QD12 228 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 IGF2-ASQ6U949 168 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 MBNL3Q9NUK0 354 aaKnown RBP11.6□□□□□ -0.55
TCOF1-207ENST00000504761 FOXA2Q9Y261 457 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-207ENST00000504761 HSBP1O75506 76 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 ORM1P02763 201 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 PMCHP20382 165 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 EFNA4P52798 201 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 SEM1Q6ZVN7 128 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 ERVK11-1P61568 191 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 ZNF383Q8NA42 475 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 WNT10AQ9GZT5 417 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 RBFOX2O43251 390 aaKnown RBP eCLIP11.6□□□□□ -0.55
TCOF1-207ENST00000504761 TGOLN2O43493 480 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 P01737 135 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 IGKV1-16P04430 117 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 OR1L6Q8NGR2 347 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 BPESC1Q9GZL8 116 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 HSPB7Q9UBY9 170 aa11.6□□□□□ -0.55
TCOF1-207ENST00000504761 HAX1O00165 279 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 LINC00305Q7Z4B0 112 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 GAR1Q9NY12 217 aaKnown RBP11.59□□□□□ -0.55
TCOF1-207ENST00000504761 TRAV40A0A0B4J280 105 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 IGHV3-66A0A0C4DH42 116 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 CGAP01215 116 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 PRB4P10163 310 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-207ENST00000504761 CCL20P78556 96 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 ATRAIDQ6UW56 229 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 SIGLECL1Q8N7X8 197 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 OR10D4PQ8NGN7 298 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 DMRTA2Q96SC8 542 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 PARLQ9H300 379 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 VSIRQ9H7M9 311 aa11.59□□□□□ -0.55
TCOF1-207ENST00000504761 FUT9Q9Y231 359 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms