RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 UPK2O00526 184 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 SAMD13Q5VXD3 122 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 GTSCR1Q86UQ5 136 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF414Q96IQ9 312 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 OTORQ9NRC9 128 aa6.02□□□□□ -1.45
SYNPO2-205ENST00000504178 APOHP02749 345 aaPredicted RBP6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 SMIM13P0DJ93 91 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 MYOD1P15172 320 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 LYZL4Q96KX0 146 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 TMEM133Q9H2Q1 129 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 CA7P43166 264 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 CFHR1Q03591 330 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 OR10J3Q5JRS4 329 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 C18orf12Q96KH6 178 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 DEPPQ9NTK1 212 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 SRCAPQ6ZRS2 3230 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 CD8AP01732 235 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 SOD3P08294 240 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 CBLN1P23435 193 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 FER1L6-AS1Q8NA97 138 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 LOC102723996A0A087X1L8 192 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 E9PLN8 166 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 LYNX1G3V0Z9 82 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 VENTXO95231 258 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 LYNX1P0DP58 116 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 ZNF497Q6ZNH5 498 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 OR5AN1Q8NGI8 311 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 FOXC2Q99958 501 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 VKORC1Q9BQB6 163 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 SIPA1L1O43166 1804 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 GREB1LQ9C091 1923 aaPredicted RBP6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 SLC17A3O00476 420 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 ATP5G3P48201 142 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 LRTM2Q8N967 370 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 ATG2BQ96BY7 2078 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 IGLV3-12A0A075B6K2 115 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 YPEL1O60688 119 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 TSPAN13O95857 204 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 DSCR9P59020 149 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 GNG5P63218 68 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 TMEM42Q69YG0 159 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 RCC1LQ96I51 464 aaKnown RBP6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 YPEL2Q96QA6 119 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 TOMM7Q9P0U1 55 aa6.01□□□□□ -1.45
SYNPO2-205ENST00000504178 CD7P09564 240 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 CD59P13987 128 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 GATA2P23769 480 aaPredicted RBP6□□□□□ -1.45
SYNPO2-205ENST00000504178 KCNS1Q96KK3 526 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 RBMY1BA6NDE4 496 aaKnown RBP6□□□□□ -1.45
SYNPO2-205ENST00000504178 RBMY1EA6NEQ0 496 aaKnown RBP6□□□□□ -1.45
SYNPO2-205ENST00000504178 C15orf61A6NNL5 157 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 NDUFA3O95167 84 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 RBMY1DP0C7P1 496 aaKnown RBP6□□□□□ -1.45
SYNPO2-205ENST00000504178 RBMY1A1P0DJD3 496 aaKnown RBP6□□□□□ -1.45
SYNPO2-205ENST00000504178 RBMY1CP0DJD4 496 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 IGFBP3P17936 291 aaPredicted RBP6□□□□□ -1.45
SYNPO2-205ENST00000504178 HOXA5P20719 270 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 CD24P25063 80 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 ZFP36L1Q07352 338 aaKnown RBP6□□□□□ -1.45
SYNPO2-205ENST00000504178 Q5BKY6 102 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 PVRIGQ6DKI7 326 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 VMO1Q7Z5L0 202 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 TRAV14DV4A0A0A6YYC5 116 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 TRAV8-6A0A0B4J262 113 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 TRAV40A0A0B4J280 105 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 ZP1P60852 638 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 MORN2Q502X0 79 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 PTPRFP10586 1907 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 A0A1B0GW15 77 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 TMEM250H0YL14 139 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 UCP1P25874 307 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 NHLRC3Q5JS37 347 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 CACNG8Q8WXS5 425 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 WBP1Q96G27 269 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 IZUMO1RA6ND01 250 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 OR11H12B2RN74 326 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 FOXA3P55318 350 aaPredicted RBP6□□□□□ -1.45
SYNPO2-205ENST00000504178 LEMD1Q68G75 181 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 CIARTQ8N365 385 aaPredicted RBP6□□□□□ -1.45
SYNPO2-205ENST00000504178 LINC00469Q8N7U9 141 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 OR11H1Q8NG94 326 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 OR11H2Q8NH07 326 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 SLC50A1Q9BRV3 221 aa6□□□□□ -1.45
SYNPO2-205ENST00000504178 ATP5LO75964 103 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 DUSP14O95147 198 aaKnown RBP5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 WNT2P09544 360 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 CNTFRP26992 372 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 BEND2Q8NDZ0 799 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 FLVCR1-AS1Q8TAF5 88 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 PGPEP1Q9NXJ5 209 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 SOX21Q9Y651 276 aaPredicted RBP5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 TRBV6-7A0A0A0MS04 114 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 RHOGP84095 191 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 MRPL16Q9NX20 251 aaKnown RBP5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 A0A1B0GUT8 65 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 IGHV1-46P01743 117 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 LAIR2Q6ISS4 152 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 IGLV3-32A0A0A0MS00 114 aa5.99□□□□□ -1.45
SYNPO2-205ENST00000504178 IGKV3D-20A0A0C4DH25 116 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms