RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
PDLIM7-210ENST00000503827 NQO2P16083 231 aa11.31□□□□□ -0.6
PDLIM7-210ENST00000503827 DTYMKP23919 212 aa11.31□□□□□ -0.6
PDLIM7-210ENST00000503827 ZNF773Q6PK81 442 aa11.31□□□□□ -0.6
PDLIM7-210ENST00000503827 CSNK1G2-AS1Q8NCQ2 148 aa11.31□□□□□ -0.6
PDLIM7-210ENST00000503827 ST8SIA2Q92186 375 aa11.31□□□□□ -0.6
PDLIM7-210ENST00000503827 RNF167Q9H6Y7 350 aa11.31□□□□□ -0.6
PDLIM7-210ENST00000503827 RABAC1Q9UI14 185 aa11.31□□□□□ -0.6
PDLIM7-210ENST00000503827 PSORS1C1Q9UIG5 152 aa11.31□□□□□ -0.6
PDLIM7-210ENST00000503827 APOBP04114 4563 aaKnown RBP11.31□□□□□ -0.6
PDLIM7-210ENST00000503827 RBFOX2O43251 390 aaKnown RBP eCLIP11.3□□□□□ -0.68e-13■■■□□ 18.5
PDLIM7-210ENST00000503827 TNFSF12O43508 249 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 ARL6IP5O75915 188 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 HPRT1P00492 218 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 POU2AF1Q16633 256 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 UBE2UQ5VVX9 321 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 DMBX1Q8NFW5 382 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 OR1L8Q8NGR8 309 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 LSM10Q969L4 123 aaKnown RBP11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 MND1Q9BWT6 205 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 NXF2Q9GZY0 626 aaKnown RBP11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 VSIRQ9H7M9 311 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 V9GY05 133 aa11.3□□□□□ -0.6
PDLIM7-210ENST00000503827 TEX50A0A1B0GTY4 177 aa11.29□□□□□ -0.6
PDLIM7-210ENST00000503827 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
PDLIM7-210ENST00000503827 MFAP4P55083 255 aa11.29□□□□□ -0.6
PDLIM7-210ENST00000503827 HES5Q5TA89 166 aa11.29□□□□□ -0.6
PDLIM7-210ENST00000503827 CNIH2Q6PI25 160 aa11.29□□□□□ -0.6
PDLIM7-210ENST00000503827 CYGBQ8WWM9 190 aa11.29□□□□□ -0.6
PDLIM7-210ENST00000503827 TMEM203Q969S6 136 aa11.29□□□□□ -0.6
PDLIM7-210ENST00000503827 HINT2Q9BX68 163 aa11.29□□□□□ -0.6
PDLIM7-210ENST00000503827 KNCNA6PVL3 124 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 EPM2AB3EWF7 344 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 APOHP02749 345 aaPredicted RBP11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 ARL6IP1Q15041 203 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 ACTL10Q5JWF8 245 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 C10orf67Q8IYJ2 551 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 LILRB2Q8N423 598 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 GRAMD2BQ96HH9 432 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 TXN2Q99757 166 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 DCSTAMPQ9H295 470 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 TMEM231Q9H6L2 316 aa11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 ELF5Q9UKW6 265 aaPredicted RBP11.28□□□□□ -0.6
PDLIM7-210ENST00000503827 IGHV3-66A0A0C4DH42 116 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 METTL21EPA6NDL7 271 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 SULT1C2O00338 296 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 CATR1Q13166 79 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 RCN1Q15293 331 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 SPHARQ15513 63 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 TMEM91Q6ZNR0 172 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 C6orf223Q8N319 242 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 SLC25A46Q96AG3 418 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 C1QTNF4Q9BXJ3 329 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 CCL28Q9NRJ3 127 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 NDUFA4L2Q9NRX3 87 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 TMED3Q9Y3Q3 217 aa11.27□□□□□ -0.61
PDLIM7-210ENST00000503827 K7EQG2 157 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 GNG7O60262 68 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 ZNF688P0C7X2 276 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 RAB6AP20340 208 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 CALRP27797 417 aaKnown RBP11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 MSMO1Q15800 293 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 TOMM20LQ6UXN7 152 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 SPATA12Q7Z6I5 190 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 PQLC1Q8N2U9 271 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 ZBTB34Q8NCN2 500 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 BPIFB6Q8NFQ5 453 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 STXBP6Q8NFX7 210 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 SECTM1Q8WVN6 248 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 UFD1Q92890 307 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 PLEKHA2Q9HB19 425 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 PLCXD1Q9NUJ7 323 aa11.26□□□□□ -0.61
PDLIM7-210ENST00000503827 TMEM189A5PLL7 270 aa11.25□□□□□ -0.61
PDLIM7-210ENST00000503827 ERVK-16P61578 105 aa11.25□□□□□ -0.61
PDLIM7-210ENST00000503827 NUTF2P61970 127 aaKnown RBP11.25□□□□□ -0.61
PDLIM7-210ENST00000503827 TRAM1Q15629 374 aa11.25□□□□□ -0.61
PDLIM7-210ENST00000503827 OR1P1Q8NH06 330 aa11.25□□□□□ -0.61
PDLIM7-210ENST00000503827 MISP3Q96FF7 219 aa11.25□□□□□ -0.61
PDLIM7-210ENST00000503827 TMEM56Q96MV1 263 aa11.25□□□□□ -0.61
PDLIM7-210ENST00000503827 EMP1P54849 157 aa11.24□□□□□ -0.61
PDLIM7-210ENST00000503827 CDNFQ49AH0 187 aa11.24□□□□□ -0.61
PDLIM7-210ENST00000503827 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
PDLIM7-210ENST00000503827 DHRSXQ8N5I4 330 aa11.24□□□□□ -0.61
PDLIM7-210ENST00000503827 ATG5Q9H1Y0 275 aa11.24□□□□□ -0.61
PDLIM7-210ENST00000503827 FKBP14Q9NWM8 211 aa11.24□□□□□ -0.61
PDLIM7-210ENST00000503827 COMMD9Q9P000 198 aa11.24□□□□□ -0.61
PDLIM7-210ENST00000503827 ANXA10Q9UJ72 324 aa11.24□□□□□ -0.61
PDLIM7-210ENST00000503827 OR51B2Q9Y5P1 312 aa11.24□□□□□ -0.61
PDLIM7-210ENST00000503827 DNAH5Q8TE73 4624 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 NBDYA0A0U1RRE5 68 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 TEX48A0A1B0GUV7 120 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 A0A1W2PS18 150 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 I3L2K1 104 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 HTN3P15516 51 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 HACD4Q5VWC8 232 aa11.23□□□□□ -0.61
PDLIM7-210ENST00000503827 C8orf59Q8N0T1 100 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms