RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SERF2P84101 59 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 PJVKQ0ZLH3 352 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 RAB31Q13636 194 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 CLLU1Q5K131 121 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 ALKAL2Q6UX46 152 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 CLEC9AQ6UXN8 241 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 C5orf56Q8N8D9 126 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 ZNF709Q8N972 641 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 ABHD5Q8WTS1 349 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 BSCL2Q96G97 398 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 SLC25A33Q9BSK2 321 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 PSMG3Q9BT73 122 aaPredicted RBP6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 WDR61Q9GZS3 305 aaKnown RBP6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 PRDM13Q9H4Q3 707 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 WFDC1Q9HC57 220 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 NPVFQ9HCQ7 196 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 TMEM160Q9NX00 188 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 TIMM9Q9Y5J7 89 aa6.47□□□□□ -1.37
TOPBP1-202ENST00000503338 FBN2P35556 2912 aa6.46□□□□□ -1.37
TOPBP1-202ENST00000503338 IGHV7-81A0A0B4J1V7 117 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 A6NDX4 124 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 NPIPB5A8MRT5 1133 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 TEX22C9J3V5 150 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 PRSS46E5RG02 174 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 H3BUX3 64 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 TRIM77I1YAP6 450 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 FCN1O00602 326 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 SMAD7O15105 426 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 MBP02144 154 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 MYOD1P15172 320 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 CR1P17927 2039 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 SULT1A2P50226 295 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 BLOC1S1P78537 153 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 WT1-ASQ06250 92 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 ARL16Q0P5N6 197 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 TUSC1Q2TAM9 212 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 C10orf55Q5SWW7 151 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 FAM120AOSQ5T036 256 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 PVRIGQ6DKI7 326 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 DPPA3Q6W0C5 159 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 HAPLN4Q86UW8 402 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 HSD17B11Q8NBQ5 300 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 OR10W1Q8NGF6 305 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 SGMS2Q8NHU3 365 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 PIFOQ8TCI5 191 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 SSMEM1Q8WWF3 244 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 C22orf15Q8WYQ4 148 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 TAF15Q92804 592 aaKnown RBP eCLIP6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 SAT2Q96F10 170 aaPredicted RBP6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 SLC35E1Q96K37 410 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 P2RX4Q99571 388 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 THYN1Q9P016 225 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 FBXO7Q9Y3I1 522 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 F11RQ9Y624 299 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 POLQO75417 2590 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 ABCA1O95477 2261 aa6.46□□□□□ -1.38
TOPBP1-202ENST00000503338 UBE2L5PA0A1B0GUS4 154 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 SMCO3A2RU48 225 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 E7EUB6 86 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 FBXO24O75426 580 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 CRYGCP07315 174 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 DEFA4P12838 97 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 HIST1H1BP16401 226 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 CTRB1P17538 263 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 PAX6P26367 422 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 ATP6V0CP27449 155 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 IER3P46695 156 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 CRIP2P52943 208 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 AKR1C1Q04828 323 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 CD69Q07108 199 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 DEFB112Q30KQ8 113 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 AKR1C8PQ5T2L2 129 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 CTRB2Q6GPI1 263 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 TEPPQ6URK8 271 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 Q6YL49 198 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 TMEM144Q7Z5S9 345 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 CENPVQ7Z7K6 275 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 CIARTQ8N365 385 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 TTC9CQ8N5M4 171 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 TMEM86BQ8N661 226 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 OR2G3Q8NGZ4 309 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 TMEM170AQ8WVE7 144 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 TMED6Q8WW62 240 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 WDR83OSQ9Y284 106 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 TENM4Q6N022 2769 aa6.45□□□□□ -1.38
TOPBP1-202ENST00000503338 TET2Q6N021 2002 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 A0A1B0GW64 132 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 NUDT19A8MXV4 375 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 TEX46H3BTG2 121 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 SCGB2A1O75556 95 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 FOSL1P15407 271 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 AREGP15514 252 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 MDKP21741 143 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 FGF7P21781 194 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 SRP14P37108 136 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 OPRK1P41145 380 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 SSBP2P81877 361 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 AKIRIN2Q53H80 203 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 BTNL8Q6UX41 500 aa6.44□□□□□ -1.38
TOPBP1-202ENST00000503338 SPNS3Q6ZMD2 512 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms