RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 TMEM95Q3KNT9 176 aa12.82□□□□□ -0.36
LMNA-217ENST00000498722 RPL7L1Q6DKI1 246 aaKnown RBP12.82□□□□□ -0.36
LMNA-217ENST00000498722 Q6ZS46 218 aa12.82□□□□□ -0.36
LMNA-217ENST00000498722 KLHDC1Q8N7A1 406 aa12.82□□□□□ -0.36
LMNA-217ENST00000498722 OR1S2Q8NGQ3 325 aa12.82□□□□□ -0.36
LMNA-217ENST00000498722 HARBI1Q96MB7 349 aa12.82□□□□□ -0.36
LMNA-217ENST00000498722 SMIM3Q9BZL3 60 aa12.82□□□□□ -0.36
LMNA-217ENST00000498722 FKBP11Q9NYL4 201 aa12.82□□□□□ -0.36
LMNA-217ENST00000498722 FOXA2Q9Y261 457 aaPredicted RBP12.82□□□□□ -0.36
LMNA-217ENST00000498722 UPK2O00526 184 aa12.81□□□□□ -0.36
LMNA-217ENST00000498722 DFFBO76075 338 aa12.81□□□□□ -0.36
LMNA-217ENST00000498722 IGKV1-16P04430 117 aa12.81□□□□□ -0.36
LMNA-217ENST00000498722 IL6RP08887 468 aaPredicted RBP12.81□□□□□ -0.36
LMNA-217ENST00000498722 OR2B8PP59922 312 aa12.81□□□□□ -0.36
LMNA-217ENST00000498722 RPS16P62249 146 aaKnown RBP12.81□□□□□ -0.36
LMNA-217ENST00000498722 HBG1P69891 147 aa12.81□□□□□ -0.36
LMNA-217ENST00000498722 HBG2P69892 147 aa12.81□□□□□ -0.36
LMNA-217ENST00000498722 VKORC1L1Q8N0U8 176 aa12.81□□□□□ -0.36
LMNA-217ENST00000498722 ATP6V1G1O75348 118 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 AMY1AP04745 511 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 FGF2P09038 288 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 LGALS7P47929 136 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 EBI3Q14213 229 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 VMA21Q3ZAQ7 101 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 SPANXN5Q5MJ07 72 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 PUSL1Q8N0Z8 303 aaKnown RBP12.8□□□□□ -0.36
LMNA-217ENST00000498722 Q8N2B8 174 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 STPG2Q8N412 459 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 C5orf56Q8N8D9 126 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 C11orf44Q8N8P7 122 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 OR5C1Q8NGR4 320 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 TSNAXQ99598 290 aaKnown RBP12.8□□□□□ -0.36
LMNA-217ENST00000498722 HIPK2Q9H2X6 1198 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 SERTAD4Q9NUC0 356 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 TMEM14BQ9NUH8 114 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 ZNF257Q9Y2Q1 563 aa12.8□□□□□ -0.36
LMNA-217ENST00000498722 STRAPQ9Y3F4 350 aaKnown RBP12.8□□□□□ -0.36
LMNA-217ENST00000498722 RPS10-NUDT3A0A1W2PQS6 291 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 H3BP45 60 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 SAA1P0DJI8 122 aaPredicted RBP12.79□□□□□ -0.36
LMNA-217ENST00000498722 KRTAP10-3P60369 221 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 HSPE1P61604 102 aaKnown RBP12.79□□□□□ -0.36
LMNA-217ENST00000498722 MMDQ15546 238 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 TMEM14EPQ6UXP3 125 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 BSCL2Q96G97 398 aaPredicted RBP12.79□□□□□ -0.36
LMNA-217ENST00000498722 ATP5SQ99766 215 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 RNF5Q99942 180 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 GINS3Q9BRX5 216 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 ARV1Q9H2C2 271 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 ENY2Q9NPA8 101 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 ANK2Q01484 3957 aa12.79□□□□□ -0.36
LMNA-217ENST00000498722 TRAV3A0A0B4J244 114 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 LINC00862A6NCI5 91 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 FGF16O43320 207 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 CST7O76096 145 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 KBTBD11O94819 623 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 TMEM267Q0VDI3 215 aaPredicted RBP12.78□□□□□ -0.36
LMNA-217ENST00000498722 Q8N6K4 173 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 RNF141Q8WVD5 230 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 CITED1Q99966 193 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 RASL11BQ9BPW5 248 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 WFDC1Q9HC57 220 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 OR51B2Q9Y5P1 312 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 PLXNB1O43157 2135 aa12.78□□□□□ -0.36
LMNA-217ENST00000498722 SRRM4A7MD48 611 aaKnown RBP12.77□□□□□ -0.37
LMNA-217ENST00000498722 IFNA5P01569 189 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 SEC11BP0C7V7 166 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 METTL15P1P0C7V9 234 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 HOXA1P49639 335 aaPredicted RBP12.77□□□□□ -0.37
LMNA-217ENST00000498722 F2RL1P55085 397 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 CLINT1Q14677 625 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 ATP6V1FQ16864 119 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 CENPVQ7Z7K6 275 aaPredicted RBP12.77□□□□□ -0.37
LMNA-217ENST00000498722 SLC7A5P1Q8MH63 180 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 TMEM217Q8N7C4 229 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 OR5B3Q8NH48 314 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 TMEM167AQ8TBQ9 72 aa12.77□□□□□ -0.37
LMNA-217ENST00000498722 NMBP08949 121 aa12.76□□□□□ -0.37
LMNA-217ENST00000498722 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
LMNA-217ENST00000498722 SLC35E3Q7Z769 313 aa12.76□□□□□ -0.37
LMNA-217ENST00000498722 LILRB2Q8N423 598 aa12.76□□□□□ -0.37
LMNA-217ENST00000498722 Q8N9W7 124 aa12.76□□□□□ -0.37
LMNA-217ENST00000498722 TEX45Q8NA69 505 aa12.76□□□□□ -0.37
LMNA-217ENST00000498722 SGMS2Q8NHU3 365 aa12.76□□□□□ -0.37
LMNA-217ENST00000498722 TMED6Q8WW62 240 aa12.76□□□□□ -0.37
LMNA-217ENST00000498722 PINX1Q96BK5 328 aaKnown RBP12.76□□□□□ -0.37
LMNA-217ENST00000498722 HEYLQ9NQ87 328 aaPredicted RBP12.76□□□□□ -0.37
LMNA-217ENST00000498722 KIAA1456Q9P272 454 aa12.76□□□□□ -0.37
LMNA-217ENST00000498722 NBR2O15453 112 aa12.75□□□□□ -0.37
LMNA-217ENST00000498722 FBXO24O75426 580 aa12.75□□□□□ -0.37
LMNA-217ENST00000498722 IGLV2-23P01705 113 aa12.75□□□□□ -0.37
LMNA-217ENST00000498722 CNTFRP26992 372 aa12.75□□□□□ -0.37
LMNA-217ENST00000498722 RAB11AP62491 216 aa12.75□□□□□ -0.37
LMNA-217ENST00000498722 RPL8P62917 257 aaKnown RBP12.75□□□□□ -0.37
LMNA-217ENST00000498722 PRCDQ00LT1 54 aa12.75□□□□□ -0.37
LMNA-217ENST00000498722 PLGLAQ15195 96 aa12.75□□□□□ -0.37
LMNA-217ENST00000498722 OR10P1Q8NGE3 313 aa12.75□□□□□ -0.37
LMNA-217ENST00000498722 GNPNAT1Q96EK6 184 aaPredicted RBP12.75□□□□□ -0.37
LMNA-217ENST00000498722 RITA1Q96K30 269 aa12.75□□□□□ -0.37
LMNA-217ENST00000498722 OR4C12Q96R67 309 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms