RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 TMEM187Q14656 261 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 AADACL3Q5VUY0 350 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 LINC00336Q6ZUF6 198 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 TMEM17Q86X19 198 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 Q8NAQ8 132 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 OR10C1Q96KK4 312 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 COMMD9Q9P000 198 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 NSG2Q9Y328 171 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 MUC4Q99102 2169 aa10.7□□□□□ -0.7
TRAF4-212ENST00000498540 MARCH11A6NNE9 402 aa10.69□□□□□ -0.7
TRAF4-212ENST00000498540 C11orf94C9JXX5 98 aa10.69□□□□□ -0.7
TRAF4-212ENST00000498540 NUPL2O15504 423 aaKnown RBP10.69□□□□□ -0.7
TRAF4-212ENST00000498540 SCGNO76038 276 aa10.69□□□□□ -0.7
TRAF4-212ENST00000498540 YIF1AO95070 293 aa10.69□□□□□ -0.7
TRAF4-212ENST00000498540 RELQ04864 619 aaPredicted RBP10.69□□□□□ -0.7
TRAF4-212ENST00000498540 LEMD1Q68G75 181 aa10.69□□□□□ -0.7
TRAF4-212ENST00000498540 HOGA1Q86XE5 327 aa10.69□□□□□ -0.7
TRAF4-212ENST00000498540 DAPK2Q9UIK4 370 aa10.69□□□□□ -0.7
TRAF4-212ENST00000498540 DNAH2Q9P225 4427 aa10.69□□□□□ -0.7
TRAF4-212ENST00000498540 C15orf61A6NNL5 157 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 RBMY1A1P0DJD3 496 aaKnown RBP10.68□□□□□ -0.7
TRAF4-212ENST00000498540 RBMY1CP0DJD4 496 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 MED14OSP0DP75 135 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 ERVK-16P61578 105 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
TRAF4-212ENST00000498540 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 FAM24BQ8N5W8 94 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 NRG4Q8WWG1 115 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 CMTM3Q96MX0 182 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 HRH4Q9H3N8 390 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 RHBDL2Q9NX52 303 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 OR51B2Q9Y5P1 312 aa10.68□□□□□ -0.7
TRAF4-212ENST00000498540 IGHV4-4A0A075B6R2 117 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 TRAV14DV4A0A0A6YYC5 116 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 IGHV4-28A0A0C4DH34 117 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 RLN1P04808 185 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 HLA-DMBP28068 263 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 GNRHRP30968 328 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 DEFB131AP59861 70 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 Q6ZTC4 211 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 DGCR14Q96DF8 476 aaKnown RBP10.67□□□□□ -0.7
TRAF4-212ENST00000498540 SLC25A38Q96DW6 304 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 AGRNO00468 2067 aa10.67□□□□□ -0.7
TRAF4-212ENST00000498540 TRAV18A0A075B6X5 111 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 DBX1A6NMT0 343 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 I3L2K1 104 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 KRASP01116 189 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 IGHV3-48P01763 117 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 APOHP02749 345 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-212ENST00000498540 GIG44P09565 113 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-212ENST00000498540 G6PCP35575 357 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 PAFAH1B2P68402 229 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 SFXN4Q6P4A7 337 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 LILRB2Q8N423 598 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 OR1P1Q8NH06 330 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 GIMAP1Q8WWP7 306 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 FCAMRQ8WWV6 532 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 ST8SIA2Q92186 375 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 SLC25A46Q96AG3 418 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 MISP3Q96FF7 219 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 NXF2Q9GZY0 626 aaKnown RBP10.66□□□□□ -0.7
TRAF4-212ENST00000498540 MS4A6AQ9H2W1 248 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 TXNL4BQ9NX01 149 aaKnown RBP10.66□□□□□ -0.7
TRAF4-212ENST00000498540 RRP15Q9Y3B9 282 aaKnown RBP10.66□□□□□ -0.7
TRAF4-212ENST00000498540 DNAH17Q9UFH2 4485 aa10.66□□□□□ -0.7
TRAF4-212ENST00000498540 TRAV10A0A0B4J240 114 aa10.65□□□□□ -0.7
TRAF4-212ENST00000498540 F2RP25116 425 aa10.65□□□□□ -0.7
TRAF4-212ENST00000498540 LPAR6P43657 344 aa10.65□□□□□ -0.7
TRAF4-212ENST00000498540 MFAP4P55083 255 aa10.65□□□□□ -0.7
TRAF4-212ENST00000498540 OR5H6Q8NGV6 325 aa10.65□□□□□ -0.7
TRAF4-212ENST00000498540 TMEM56Q96MV1 263 aa10.65□□□□□ -0.7
TRAF4-212ENST00000498540 ELOA3CA0A087WX78 387 aaPredicted RBP10.64□□□□□ -0.71
TRAF4-212ENST00000498540 IGHV3-66A0A0C4DH42 116 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 MEIS3P1A6NDR6 274 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 PRSS29PA6NIE9 313 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 DNASE2O00115 360 aaPredicted RBP10.64□□□□□ -0.71
TRAF4-212ENST00000498540 RTL8CO15255 209 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 ST8SIA3O43173 380 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 PGLYRP1O75594 196 aaPredicted RBP10.64□□□□□ -0.71
TRAF4-212ENST00000498540 SNAPC5O75971 98 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 DFFBO76075 338 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 FGF9P31371 208 aaPredicted RBP10.64□□□□□ -0.71
TRAF4-212ENST00000498540 HERV-K104P61576 105 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 OR5AP2Q8NGF4 316 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 TXN2Q99757 166 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 VSIRQ9H7M9 311 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 TMEM14BQ9NUH8 114 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 PRNDQ9UKY0 176 aa10.64□□□□□ -0.71
TRAF4-212ENST00000498540 MT-CO2P00403 227 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 EIF4EP06730 217 aaKnown RBP10.63□□□□□ -0.71
TRAF4-212ENST00000498540 MIFP14174 115 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 C4BPBP20851 252 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 PVRIGQ6DKI7 326 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 TOMM20LQ6UXN7 152 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 TRPT1Q86TN4 253 aaKnown RBP10.63□□□□□ -0.71
TRAF4-212ENST00000498540 TPRA1Q86W33 373 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 STHQ8IWL8 128 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 CADM3Q8N126 398 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 GINS3Q9BRX5 216 aa10.63□□□□□ -0.71
TRAF4-212ENST00000498540 RNF126Q9BV68 326 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms