RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 PLXNB1O43157 2135 aa13.78□□□□□ -0.2
CTDSP1-215ENST00000498160 A0A1B0GW64 132 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 FAM223BA6NKX1 122 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 SCGB1D2O95969 90 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 GIPP09681 153 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 WT1-ASQ06250 92 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 FCN2Q15485 313 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 ASPHD1Q5U4P2 390 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 FAM223AQ8IWN6 122 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 RNF152Q8N8N0 203 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 OR5AU1Q8NGC0 362 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 OR10W1Q8NGF6 305 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 WIPF2Q8TF74 440 aaPredicted RBP13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 LINC00527Q9UJ94 153 aa13.77□□□□□ -0.21
CTDSP1-215ENST00000498160 SETD2Q9BYW2 2564 aaPredicted RBP13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 A0A0G2JLM5 398 aa13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 AREGP15514 252 aa13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 FGL1Q08830 312 aa13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 IL15RAQ13261 267 aa13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 C2orf68Q2NKX9 166 aa13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 SLC24A4Q8NFF2 622 aa13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 USMG5Q96IX5 58 aa13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 ZNF436Q9C0F3 470 aaPredicted RBP13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 ZNF355PQ9NSJ1 428 aa13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 TET2Q6N021 2002 aaPredicted RBP13.76□□□□□ -0.21
CTDSP1-215ENST00000498160 L7N2F9 121 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 MBPP02686 304 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 PSMB8P28062 276 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 H2BFSP57053 126 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 RAP2BP61225 183 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 RAB11AP62491 216 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 RPL23AP62750 156 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 VAMP2P63027 116 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 BSXQ3C1V8 233 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 KRTAP21-3Q3LHN1 58 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 C2orf83Q53S99 150 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 OR5T1Q8NG75 326 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 OR11H7Q8NGC8 314 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 SMIM8Q96KF7 97 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 CUBNO60494 3623 aa13.75□□□□□ -0.21
CTDSP1-215ENST00000498160 K7EPK0 472 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 HAX1O00165 279 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 TSC22D2O75157 780 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 NXPH3O95157 252 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 SIX6O95475 246 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 IFNA10P01566 189 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 APELAP0DMC3 54 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 PF4V1P10720 104 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 NPY1RP25929 384 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 S100A10P60903 97 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 POLR2GP62487 172 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 EXOSC2Q13868 293 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 SPINK9Q5DT21 86 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 C12orf54Q6X4T0 127 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 ZNF329Q86UD4 541 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 NECAP1Q8NC96 275 aa13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 LSM5Q9Y4Y9 91 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-215ENST00000498160 TRBV9A0A0B4J1U6 114 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 SSSCA1O60232 199 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 TRGV3P03979 118 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 RAB9AP51151 201 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 RAB32Q13637 225 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 RNASEH2CQ8TDP1 164 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 CHAC2Q8WUX2 184 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 PPP1R1CQ8WVI7 109 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 CXorf58Q96LI9 332 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 ATP6V0BQ99437 205 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 P2RX4Q99571 388 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 MAGT1Q9H0U3 335 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 STRAPQ9Y3F4 350 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 NF1P21359 2839 aa13.73□□□□□ -0.21
CTDSP1-215ENST00000498160 IGLV11-55A0A075B6I3 123 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 RPS10-NUDT3A0A1W2PQS6 291 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 E5RGE8 158 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 SOX15O60248 233 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 REG1AP05451 166 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 RNASE2P10153 161 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 CXCL3P19876 107 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 TPPP2P59282 170 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 PVRIGQ6DKI7 326 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 ETFRF1Q6IPR1 90 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 SLC25A24Q6NUK1 477 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 MYOZ3Q8TDC0 251 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 TAF15Q92804 592 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 PSENENQ9NZ42 101 aa13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 RCL1Q9Y2P8 373 aaKnown RBP13.72□□□□□ -0.21
CTDSP1-215ENST00000498160 DEDDO75618 318 aa13.71□□□□□ -0.21
CTDSP1-215ENST00000498160 OR8U8P0C7N1 319 aa13.71□□□□□ -0.21
CTDSP1-215ENST00000498160 IAPPP10997 89 aa13.71□□□□□ -0.21
CTDSP1-215ENST00000498160 CD83Q01151 205 aa13.71□□□□□ -0.21
CTDSP1-215ENST00000498160 THAP6Q8TBB0 222 aa13.71□□□□□ -0.21
CTDSP1-215ENST00000498160 VN1R17PQ8TDU5 208 aa13.71□□□□□ -0.21
CTDSP1-215ENST00000498160 UBE2E2Q96LR5 201 aa13.71□□□□□ -0.21
CTDSP1-215ENST00000498160 GAR1Q9NY12 217 aaKnown RBP13.71□□□□□ -0.21
CTDSP1-215ENST00000498160 TSSC4Q9Y5U2 329 aaPredicted RBP13.71□□□□□ -0.21
CTDSP1-215ENST00000498160 TCRBV4S1A1TA0A5B7 111 aa13.7□□□□□ -0.22
CTDSP1-215ENST00000498160 SCGB2A1O75556 95 aa13.7□□□□□ -0.22
CTDSP1-215ENST00000498160 MPC2O95563 127 aa13.7□□□□□ -0.22
CTDSP1-215ENST00000498160 CDX1P47902 265 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-215ENST00000498160 RHOGP84095 191 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms