RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 C10orf105Q8TEF2 133 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 SPSB1Q96BD6 273 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 IP6K3Q96PC2 410 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 TMEM175Q9BSA9 504 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 RSG1Q9BU20 258 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 NDUFAF3Q9BU61 184 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 C9orf16Q9BUW7 83 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 EIF2AQ9BY44 585 aaKnown RBP1.09□□□□□ -2.23
XRN1-214ENST00000498077 C1orf198Q9H425 327 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 NINJ2Q9NZG7 142 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 MAD2L2Q9UI95 211 aa1.09□□□□□ -2.23
XRN1-214ENST00000498077 ANKRD36CQ5JPF3 1778 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 hCG_1818297A0A087WSY0 165 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 TEX49A0A1B0GTD5 131 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 A0A1B0GUA9 196 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 C9orf92A6NGG3 77 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 M0R378 163 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 HBE1P02100 147 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 UCHL1P09936 223 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 MPC1LP0DKB6 136 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 SAGP10523 405 aaPredicted RBP1.09□□□□□ -2.24
XRN1-214ENST00000498077 RPL12P30050 165 aaKnown RBP1.09□□□□□ -2.24
XRN1-214ENST00000498077 PPIFP30405 207 aaKnown RBP1.09□□□□□ -2.24
XRN1-214ENST00000498077 P2RY1P47900 373 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 DSCR10P59022 87 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 IL15RAQ13261 267 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 FAM53BQ14153 422 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 NSUN5P1Q3KNT7 163 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 CENPWQ5EE01 88 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 C4orf50Q6ZRC1 276 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 CLEC1AQ8NC01 280 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 OR2A1Q8NGT9 310 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 OR6N1Q8NGY5 312 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 OR5J2Q8NH18 312 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 SLAMF9Q96A28 289 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 PLEKHB2Q96CS7 222 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 SCRN2Q96FV2 425 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 OR2V2Q96R30 315 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 JPH2Q9BR39 696 aaPredicted RBP1.09□□□□□ -2.24
XRN1-214ENST00000498077 GHITMQ9H3K2 345 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 LINC00574Q9H8X3 128 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 GPN2Q9H9Y4 310 aaPredicted RBP1.09□□□□□ -2.24
XRN1-214ENST00000498077 SDR39U1Q9NRG7 319 aaPredicted RBP1.09□□□□□ -2.24
XRN1-214ENST00000498077 C20orf141Q9NUB4 165 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 CMTM6Q9NX76 183 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 COA4Q9NYJ1 87 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 CNOT2Q9NZN8 540 aaKnown RBP1.09□□□□□ -2.24
XRN1-214ENST00000498077 PRO0255Q9UI72 69 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 NLRC5Q86WI3 1866 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 PIGBOS1A0A0B4J2F0 54 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 KRBOX1C9JBD0 128 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 H3BRN7 92 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 CRYGCP07315 174 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 PAX1P15863 534 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 U2AF2P26368 475 aaKnown RBP eCLIP1.09□□□□□ -2.242e-8■□□□□ 10.6
XRN1-214ENST00000498077 FKBP2P26885 142 aaKnown RBP1.09□□□□□ -2.24
XRN1-214ENST00000498077 CCND2P30279 289 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 ETV6P41212 452 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 ASIPP42127 132 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 INSL3P51460 131 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 POLR2GP62487 172 aaKnown RBP eCLIP1.09□□□□□ -2.24
XRN1-214ENST00000498077 GNMTQ14749 295 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 LY6EQ16553 131 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 Q499Y3 187 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 HBMQ6B0K9 141 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 REEP3Q6NUK4 255 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 AMTNQ6UX39 209 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 SEM1Q6ZVN7 128 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 TMPRSS9Q7Z410 1059 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 FAM109AQ8N4B1 249 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 OR52N1Q8NH53 320 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 OR1S1Q8NH92 325 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 KCTD7Q96MP8 289 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 PRR15LQ9BU68 103 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 RSPO3Q9BXY4 272 aaPredicted RBP1.09□□□□□ -2.24
XRN1-214ENST00000498077 NMUR1Q9HB89 426 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 LINC00846Q9NV44 126 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 CLEC5AQ9NY25 188 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 LHX3Q9UBR4 397 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 GHRLQ9UBU3 117 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 TNFSF18Q9UNG2 199 aa1.09□□□□□ -2.24
XRN1-214ENST00000498077 PLXNB3Q9ULL4 1909 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 TMEM210A6NLX4 147 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ZNF724A8MTY0 619 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 hCG_2039718K7EN88 272 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 GJB3O75712 270 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 LTAP01374 205 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 IL5P05113 134 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 LYNX1P0DP58 116 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 HOXD13P35453 343 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 KCNJ3P48549 501 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 CCR8P51685 355 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 CLDN12P56749 244 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ROMO1P60602 79 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 MAGOHP61326 146 aaKnown RBP1.08□□□□□ -2.24
XRN1-214ENST00000498077 CACNG1Q06432 222 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 ARL16Q0P5N6 197 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 PEA15Q15121 130 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 LGALS9BQ3B8N2 356 aa1.08□□□□□ -2.24
XRN1-214ENST00000498077 GALNTL6Q49A17 601 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms