RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 TMEM14AQ9Y6G1 99 aa1.5□□□□□ -2.17
CBX3-208ENST00000497498 KCNE3Q9Y6H6 103 aa1.5□□□□□ -2.17
CBX3-208ENST00000497498 V9GYH0 126 aa1.5□□□□□ -2.17
CBX3-208ENST00000497498 TET2Q6N021 2002 aaPredicted RBP1.5□□□□□ -2.17
CBX3-208ENST00000497498 NUP205Q92621 2012 aa1.5□□□□□ -2.17
CBX3-208ENST00000497498 SDK2Q58EX2 2172 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 ZNF638Q14966 1978 aaKnown RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 ABCA4P78363 2273 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 IGHV1-69DA0A0B4J2H0 117 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 LOC285095A0A1B0GVY8 99 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 A0A1W2PQL4 384 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 PRORSD1PA6NEY8 169 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 MCRIP1C9JLW8 97 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 F5H5P2 479 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 PRAMEF26H0Y7S4 382 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 APOC4-APOC2K7ER74 178 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TAAR5O14804 337 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TCF21O43680 179 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 GSTZ1O43708 216 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 ENTPD6O75354 484 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 CNMDO75829 334 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 MPC2O95563 127 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 MT-CO2P00403 227 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 CST4P01036 141 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 IGKV1D-16P01601 117 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 APOC2P02655 101 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TCRBP04435 133 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TYMSP04818 313 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 APODP05090 189 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 PGA4P0DJD7 388 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 PGA3P0DJD8 388 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 SLC25A4P12235 298 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 ZNF35P13682 527 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 KCNE1P15382 129 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 HLA-GP17693 338 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 GABRG2P18507 467 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 NELFEP18615 380 aaKnown RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 USF1P22415 310 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 LOXP28300 417 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 ELK4P28324 431 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR10J1P30954 320 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 POLR2IP36954 125 aaKnown RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 SNCAP37840 140 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 P2RY2P41231 377 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 AKR1C3P42330 323 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 GABRA2P47869 451 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TTPAP49638 278 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 EVX1P49640 407 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 CLDN12P56749 244 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TCTAP57738 103 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR4D2P58180 307 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TAS2R31P59538 309 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 LSM3P62310 102 aaKnown RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 HIST1H3AP68431 136 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 CDK6Q00534 326 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 BAXQ07812 192 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 LOXL1Q08397 574 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 MLLT11Q13015 90 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 TPBGQ13641 420 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 MAD2L1BPQ15013 274 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 PGGHGQ32M88 737 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 PLPPR5Q32ZL2 321 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 ACOT6Q3I5F7 207 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 SLC36A2Q495M3 483 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 MORN2Q502X0 79 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 MESTQ5EB52 335 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 BEX5Q5H9J7 111 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 SPANXN3Q5MJ09 141 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 C1orf194Q5T5A4 169 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 SAMD13Q5VXD3 122 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 ALKAL2Q6UX46 152 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TOMM20LQ6UXN7 152 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 CASP12Q6UXS9 341 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 SHISA6Q6ZSJ9 500 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR2W3Q7Z3T1 314 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 LYG2Q86SG7 212 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 NIT1Q86X76 327 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 BLIDQ8IZY5 108 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 VKORC1L1Q8N0U8 176 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TMEM256Q8N2U0 113 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 TOMM5Q8N4H5 51 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 KCNRGQ8N5I3 272 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 NPWQ8N729 165 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 LRRC75AQ8NAA5 344 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 INO80EQ8NBZ0 244 aaPredicted RBP1.49□□□□□ -2.17
CBX3-208ENST00000497498 PLPP5Q8NEB5 264 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 NOXO1Q8NFA2 376 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 PROKR2Q8NFJ6 384 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR10W1Q8NGF6 305 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR4B1Q8NGF8 309 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR4D6Q8NGJ1 314 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR51A2Q8NGJ7 313 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR10D4PQ8NGN7 298 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 OR13C4Q8NGS5 318 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 CIRBP-AS1Q8TBR5 109 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 ACTL9Q8TC94 416 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 GNPDA2Q8TDQ7 276 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 ASB17Q8WXJ9 295 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 ISOC2Q96AB3 205 aa1.49□□□□□ -2.17
CBX3-208ENST00000497498 C8orf44Q96CB5 159 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms