RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 DEFA4P12838 97 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 CXCL3P19876 107 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 FOXE3Q13461 319 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 C10orf99Q6UWK7 81 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 NMES1Q9C002 83 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 ZNF355PQ9NSJ1 428 aa17.02■□□□□ 0.32
C9orf3-222ENST00000496567 CYB5BO43169 146 aa17.02■□□□□ 0.31
C9orf3-222ENST00000496567 CCNKO75909 580 aa17.02■□□□□ 0.31
C9orf3-222ENST00000496567 BRI3O95415 125 aa17.02■□□□□ 0.31
C9orf3-222ENST00000496567 LY86O95711 162 aa17.02■□□□□ 0.31
C9orf3-222ENST00000496567 SCGB1D2O95969 90 aa17.02■□□□□ 0.31
C9orf3-222ENST00000496567 SNCAP37840 140 aa17.02■□□□□ 0.31
C9orf3-222ENST00000496567 H2BFSP57053 126 aa17.02■□□□□ 0.31
C9orf3-222ENST00000496567 TMEM65Q6PI78 240 aa17.02■□□□□ 0.31
C9orf3-222ENST00000496567 SLA2Q9H6Q3 261 aa17.02■□□□□ 0.31
C9orf3-222ENST00000496567 PF4V1P10720 104 aa17.01■□□□□ 0.31
C9orf3-222ENST00000496567 PSMB8P28062 276 aa17.01■□□□□ 0.31
C9orf3-222ENST00000496567 CD83Q01151 205 aa17.01■□□□□ 0.31
C9orf3-222ENST00000496567 OR1L6Q8NGR2 347 aa17.01■□□□□ 0.31
C9orf3-222ENST00000496567 WFDC12Q8WWY7 111 aa17.01■□□□□ 0.31
C9orf3-222ENST00000496567 CIB3Q96Q77 187 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-222ENST00000496567 MAGT1Q9H0U3 335 aa17.01■□□□□ 0.31
C9orf3-222ENST00000496567 ZFP57Q9NU63 452 aa17.01■□□□□ 0.31
C9orf3-222ENST00000496567 SUB1P53999 127 aaKnown RBP eCLIP17■□□□□ 0.31
C9orf3-222ENST00000496567 ZNF114Q8NC26 417 aa17■□□□□ 0.31
C9orf3-222ENST00000496567 ST6GAL2Q96JF0 529 aa17■□□□□ 0.31
C9orf3-222ENST00000496567 F11RQ9Y624 299 aaKnown RBP17■□□□□ 0.31
C9orf3-222ENST00000496567 MBPP02686 304 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-222ENST00000496567 HIST1H1BP16401 226 aaKnown RBP16.99■□□□□ 0.31
C9orf3-222ENST00000496567 HTR2BP41595 481 aa16.99■□□□□ 0.31
C9orf3-222ENST00000496567 POLR2GP62487 172 aaKnown RBP eCLIP16.99■□□□□ 0.31
C9orf3-222ENST00000496567 IL15RAQ13261 267 aa16.99■□□□□ 0.31
C9orf3-222ENST00000496567 C12orf54Q6X4T0 127 aa16.99■□□□□ 0.31
C9orf3-222ENST00000496567 RNF152Q8N8N0 203 aa16.99■□□□□ 0.31
C9orf3-222ENST00000496567 OR1P1Q8NH06 330 aa16.99■□□□□ 0.31
C9orf3-222ENST00000496567 RANGRFQ9HD47 186 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-222ENST00000496567 U3KQ87 197 aa16.99■□□□□ 0.31
C9orf3-222ENST00000496567 TRGV3P03979 118 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 RAB9AP51151 201 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 MS4A10Q96PG2 267 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 P2RX4Q99571 388 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 IAPPP10997 89 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 SRSF4Q08170 494 aaKnown RBP16.98■□□□□ 0.31
C9orf3-222ENST00000496567 KLK9Q2XQG4 91 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 ASB13Q8WXK3 278 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 RAB40CQ96S21 281 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 KLK15Q9H2R5 256 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 THYN1Q9P016 225 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 KLK9Q9UKQ9 250 aa16.98■□□□□ 0.31
C9orf3-222ENST00000496567 TRBV9A0A0B4J1U6 114 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 SSSCA1O60232 199 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 PRH1P02810 166 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 CD28P10747 220 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 ATP5IP56385 69 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-222ENST00000496567 TPPP2P59282 170 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 S100A10P60903 97 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 RPP30P78346 268 aaKnown RBP16.97■□□□□ 0.31
C9orf3-222ENST00000496567 RAB32Q13637 225 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 BSXQ3C1V8 233 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 SLC25A24Q6NUK1 477 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 C19orf35Q6ZS72 473 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 NOXA1Q86UR1 476 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 SLC24A4Q8NFF2 622 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 FANCD2OSQ96PS1 177 aa16.97■□□□□ 0.31
C9orf3-222ENST00000496567 LSM5Q9Y4Y9 91 aaKnown RBP16.97■□□□□ 0.31
C9orf3-222ENST00000496567 K7EPK0 472 aa16.96■□□□□ 0.31
C9orf3-222ENST00000496567 IFNA10P01566 189 aa16.96■□□□□ 0.31
C9orf3-222ENST00000496567 RNASE2P10153 161 aaKnown RBP16.96■□□□□ 0.31
C9orf3-222ENST00000496567 KRTAP21-3Q3LHN1 58 aa16.96■□□□□ 0.31
C9orf3-222ENST00000496567 TCTEX1D4Q5JR98 221 aa16.96■□□□□ 0.31
C9orf3-222ENST00000496567 C3orf56Q8N813 242 aa16.96■□□□□ 0.31
C9orf3-222ENST00000496567 NECAP1Q8NC96 275 aa16.96■□□□□ 0.31
C9orf3-222ENST00000496567 ZNF436Q9C0F3 470 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-222ENST00000496567 RCL1Q9Y2P8 373 aaKnown RBP16.96■□□□□ 0.31
C9orf3-222ENST00000496567 IGLV11-55A0A075B6I3 123 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 TCRBV4S1A1TA0A5B7 111 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 FAM223BA6NKX1 122 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 RLN2P04090 185 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 RPLP1P05386 114 aaKnown RBP16.95■□□□□ 0.3
C9orf3-222ENST00000496567 PVALBP20472 110 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-222ENST00000496567 NPY1RP25929 384 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 KRTAP10-3P60369 221 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 C2orf83Q53S99 150 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 LCNL1Q6ZST4 164 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 FAM223AQ8IWN6 122 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 C11orf44Q8N8P7 122 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 WDR89Q96FK6 387 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-222ENST00000496567 USMG5Q96IX5 58 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 SMIM8Q96KF7 97 aa16.95■□□□□ 0.3
C9orf3-222ENST00000496567 A0A0G2JLM5 398 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 TAS2R30P59541 319 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 RHOGP84095 191 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 MYOZ3Q8TDC0 251 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 PPP1R1CQ8WVI7 109 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 MDFIQ99750 246 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 ZNF747Q9BV97 191 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 L7N2F9 121 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 CORTO00230 105 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 OR2J3O76001 311 aa16.94■□□□□ 0.3
C9orf3-222ENST00000496567 GIPP09681 153 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms