RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 FAM90A24PP0C7X0 464 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 CCL1P22362 96 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 NPPCP23582 126 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 KLF5Q13887 457 aaPredicted RBP6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 ZNF585BQ52M93 769 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 MEIG1Q5JSS6 88 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 TCEAL8Q8IYN2 117 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 UBALD2Q8IYN6 164 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 OXGR1Q96P68 337 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 C11orf1Q9H5F2 150 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 PGPEP1Q9NXJ5 209 aa6.86□□□□□ -1.31
CRNKL1-205ENST00000496549 NPIPB5A8MRT5 1133 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 CGAP01215 116 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 MFAP4P55083 255 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 PLP2Q04941 152 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 SSC4DQ8WTU2 575 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 FAM131CQ96AQ9 280 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 PGLYRP4Q96LB8 373 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 SGK494Q96LW2 274 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 PRELID3AQ96N28 172 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 JMJD8Q96S16 334 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 SPANXB1Q9NS25 103 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 IGKV1D-13A0A0B4J2D9 117 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 IGHV1-24A0A0C4DH33 117 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 hCG_38984A0A1B0GV85 526 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 C2orf70A6NJV1 201 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 SH2D7A6NKC9 451 aaPredicted RBP6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 PRR33A8MZF0 331 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 HRKO00198 91 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 SLC25A5P05141 298 aaKnown RBP6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 IGKV1-13P0DP09 117 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 COL8A1P27658 744 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 P2RY2P41231 377 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 SPATA31B1PQ5VZV4 182 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 COX14Q96I36 57 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 OBP2BQ9NPH6 170 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 OBP2AQ9NY56 170 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 WDR83OSQ9Y284 106 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 INSIG2Q9Y5U4 225 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 KIAA1671Q9BY89 1806 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 LAMTOR5O43504 91 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 FOXH1O75593 365 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 CEACAM5P06731 702 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 RPL30P62888 115 aaKnown RBP6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 CACNG7P62955 275 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 SRSF9Q13242 221 aaKnown RBP eCLIP6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 ANXA2RQ3ZCQ2 193 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 TMEM178AQ8NBL3 297 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 KLF12Q9Y4X4 402 aa6.85□□□□□ -1.31
CRNKL1-205ENST00000496549 PRSS29PA6NIE9 313 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 CA3P07451 260 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 SFTPA2Q8IWL1 248 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 SFTPA1Q8IWL2 248 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 NPIPB13A6NJU9 1138 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 NPIPB4C9JG80 1138 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 CA6P23280 308 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 FOXI2Q6ZQN5 318 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 Q6ZUT4 128 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 RAB9BQ9NP90 201 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 AMMECR1Q9Y4X0 333 aaPredicted RBP6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 SHANK1Q9Y566 2161 aa6.84□□□□□ -1.31
CRNKL1-205ENST00000496549 TRBV20-1A0A075B6N2 111 aa6.84□□□□□ -1.32
CRNKL1-205ENST00000496549 COX7A2P2O60397 106 aa6.84□□□□□ -1.32
CRNKL1-205ENST00000496549 P04436 131 aa6.84□□□□□ -1.32
CRNKL1-205ENST00000496549 SCGB1D4Q6XE38 83 aa6.84□□□□□ -1.32
CRNKL1-205ENST00000496549 OR1L1Q8NH94 360 aa6.84□□□□□ -1.32
CRNKL1-205ENST00000496549 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.84□□□□□ -1.32
CRNKL1-205ENST00000496549 TP73-AS1Q9UF72 201 aa6.84□□□□□ -1.32
CRNKL1-205ENST00000496549 TNFRSF18Q9Y5U5 241 aa6.84□□□□□ -1.32
CRNKL1-205ENST00000496549 CUL9Q8IWT3 2517 aa6.84□□□□□ -1.32
CRNKL1-205ENST00000496549 LOC389332A0A1B0GUA5 103 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 A0A1W2PP55 124 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 A0A1W2PQD3 144 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 A0A1W2PQU0 124 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 FNDC10F2Z333 226 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 VWC2Q2TAL6 325 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 RPEQ96AT9 228 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 CHAC1Q9BUX1 264 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 A0A0G2JRQ6 117 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 PRSS38A1L453 326 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 KIR2DS3K7RE56 304 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 FOXI1Q12951 378 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 IGFBP7Q16270 282 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 NRN1LQ496H8 165 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 SPEM1Q8N4L4 309 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 GCSAMQ8N6F7 178 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 NUP35Q8NFH5 326 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 SMIM27A0A1W2PRY6 76 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 FABP5P3A8MUU1 101 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 ZNF542PQ5EBM4 170 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 CYYR1Q96J86 154 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 C20orf78Q9BR46 151 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 TMUB1Q9BVT8 246 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 CFHR5Q9BXR6 569 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 DEPPQ9NTK1 212 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 PLXNB3Q9ULL4 1909 aa6.83□□□□□ -1.32
CRNKL1-205ENST00000496549 MT-ATP8P03928 68 aa6.82□□□□□ -1.32
CRNKL1-205ENST00000496549 SMIM10L1P0DMW3 83 aa6.82□□□□□ -1.32
CRNKL1-205ENST00000496549 SUMO3P55854 103 aaPredicted RBP6.82□□□□□ -1.32
CRNKL1-205ENST00000496549 TWIST1Q15672 202 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms