RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SERTM2A0A1B0GWG4 89 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 F2RL2O00254 374 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 DHHO43323 396 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 RHBDL1O75783 438 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 IGLV2-14P01704 120 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 HIST1H1EP10412 219 aaKnown RBP7.53□□□□□ -1.2
HPS4-217ENST00000496385 CRYBA4P53673 196 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 PDCD1Q15116 288 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 KRTAP27-1Q3LI81 207 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 SLC35E4Q6ICL7 350 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 MOB1BQ7L9L4 216 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 RNF138Q8WVD3 245 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 MBD6Q96DN6 1003 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 TECRQ9NZ01 308 aaKnown RBP7.53□□□□□ -1.2
HPS4-217ENST00000496385 YTHDF2Q9Y5A9 579 aaKnown RBP7.53□□□□□ -1.2
HPS4-217ENST00000496385 SEC16AO15027 2179 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 hCG_38984A0A1B0GV85 526 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 SIVA1O15304 175 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 EFNA2O43921 213 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 SLAQ13239 276 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 GABRA6Q16445 453 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 FOXI2Q6ZQN5 318 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 SPATA12Q7Z6I5 190 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 OR1L3Q8NH93 324 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 OR2T6Q8NHC8 308 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 ST6GALNAC6Q969X2 333 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 MRAP2Q96G30 205 aa7.53□□□□□ -1.2
HPS4-217ENST00000496385 AKIRIN1Q9H9L7 192 aaPredicted RBP7.53□□□□□ -1.2
HPS4-217ENST00000496385 A0A0G2JLM5 398 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 A0A1W2PR80 420 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 GAGE12HA6NDE8 117 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 SYNGR3O43761 229 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 OR9G9P0C7N8 305 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 TMPRSS3P57727 454 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 PDLIM3Q53GG5 364 aaPredicted RBP7.52□□□□□ -1.21
HPS4-217ENST00000496385 CENPWQ5EE01 88 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 IBA57Q5T440 356 aaKnown RBP7.52□□□□□ -1.21
HPS4-217ENST00000496385 RNASEKQ6P5S7 137 aaKnown RBP7.52□□□□□ -1.21
HPS4-217ENST00000496385 ZNF645Q8N7E2 425 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 WDR31Q8NA23 367 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 CHRNA10Q9GZZ6 450 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 SDK2Q58EX2 2172 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 ARHGAP21Q5T5U3 1957 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 MAP1BP46821 2468 aaKnown RBP7.52□□□□□ -1.21
HPS4-217ENST00000496385 A0A087X0K7 114 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 ANKRD30BLA7E2S9 258 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 LEPROTL1O95214 131 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 LIPFP07098 398 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 SRSF6Q13247 344 aaKnown RBP7.52□□□□□ -1.21
HPS4-217ENST00000496385 FAM120AOSQ5T036 256 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 FAM231DQ6ZW35 169 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 TMEM251Q8N6I4 163 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 C5orf30Q96GV9 206 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 MAP1LC3CQ9BXW4 147 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 TMEM167BQ9NRX6 74 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 SLC25A10Q9UBX3 287 aaPredicted RBP7.52□□□□□ -1.21
HPS4-217ENST00000496385 SSUH2Q9Y2M2 353 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 NBEAQ8NFP9 2946 aa7.52□□□□□ -1.21
HPS4-217ENST00000496385 TRAV26-1A0A087WT03 109 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 A0A1W2PPM0 123 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 hDV102S1A0JD36 115 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 C21orf140B9A014 251 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 OTX2P32243 289 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 EDDM3BP56851 147 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 RTL8BQ17RB0 113 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 COLCA1Q6ZS62 124 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 SHISA6Q6ZSJ9 500 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 C2orf91Q6ZV80 131 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 MKXQ8IYA7 352 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 H1FXQ92522 213 aaKnown RBP7.51□□□□□ -1.21
HPS4-217ENST00000496385 TRIB1Q96RU8 372 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 GTSF1LQ9H1H1 148 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 CRIM1Q9NZV1 1036 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 MSRB2Q9Y3D2 182 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 URB1O60287 2271 aaKnown RBP7.51□□□□□ -1.21
HPS4-217ENST00000496385 ZNF207O43670 478 aaKnown RBP7.51□□□□□ -1.21
HPS4-217ENST00000496385 SPINK4O60575 86 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 CCNOP22674 350 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 SPATA46Q5T0L3 261 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 NHLRC2Q8NBF2 726 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 STXBP6Q8NFX7 210 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 PIGCQ92535 297 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 POM121L2Q96KW2 1035 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 HSPB8Q9UJY1 196 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 ZNF257Q9Y2Q1 563 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 SPCS1Q9Y6A9 102 aa7.51□□□□□ -1.21
HPS4-217ENST00000496385 H3BUT2 72 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 RRHO14718 337 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 ZG16O60844 167 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 SCRG1O75711 98 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 GOSR1O95249 250 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 FABP2P12104 132 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 PQLC2Q6ZP29 291 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 OR9G4Q8NGQ1 327 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 OR4A16Q8NH70 328 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.5□□□□□ -1.21
HPS4-217ENST00000496385 PPP1R3CQ9UQK1 317 aa7.5□□□□□ -1.21
HPS4-217ENST00000496385 ATMQ13315 3056 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms