RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 CRYGCP07315 174 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 MYOD1P15172 320 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 AREGP15514 252 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 BTCP35070 178 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 DEFA1P59665 94 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 DEFA3P59666 94 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 HSPE1P61604 102 aaKnown RBP12.63□□□□□ -0.39
SF3A1-209ENST00000496189 SUPT4H1P63272 117 aaKnown RBP12.63□□□□□ -0.39
SF3A1-209ENST00000496189 EGFEM1PQ0D2K5 195 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 ASAH1Q13510 395 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 C15orf32Q32M92 178 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 DLX4Q92988 240 aaPredicted RBP12.63□□□□□ -0.39
SF3A1-209ENST00000496189 LSM10Q969L4 123 aaKnown RBP12.63□□□□□ -0.39
SF3A1-209ENST00000496189 OR4C12Q96R67 309 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 NDUFA4L2Q9NRX3 87 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 FBXL7Q9UJT9 491 aa12.63□□□□□ -0.39
SF3A1-209ENST00000496189 TNCP24821 2201 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 A0A0B4J2A0 478 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 DUXBA0A1W2PPF3 345 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 E7EUB6 86 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 SFT2D2O95562 160 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 REG1AP05451 166 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 P0C879 139 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 CTRB1P17538 263 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 PPP1R1AQ13522 171 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 CTRB2Q6GPI1 263 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 LHFPL5Q8TAF8 219 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 EEF1AKMT3Q96AZ1 226 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 CXorf58Q96LI9 332 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.62□□□□□ -0.39
SF3A1-209ENST00000496189 SHPKQ9UHJ6 478 aa12.62□□□□□ -0.39
SF3A1-209ENST00000496189 IFNA17P01571 189 aa12.61□□□□□ -0.39
SF3A1-209ENST00000496189 HLA-AP01891 365 aaKnown RBP12.61□□□□□ -0.39
SF3A1-209ENST00000496189 TCRBP04435 133 aa12.61□□□□□ -0.39
SF3A1-209ENST00000496189 OR13C7P0DN81 318 aa12.61□□□□□ -0.39
SF3A1-209ENST00000496189 C4orf46Q504U0 113 aa12.61□□□□□ -0.39
SF3A1-209ENST00000496189 SLC35G3Q8N808 338 aa12.61□□□□□ -0.39
SF3A1-209ENST00000496189 OR1L6Q8NGR2 347 aa12.61□□□□□ -0.39
SF3A1-209ENST00000496189 ENKURQ8TC29 256 aa12.61□□□□□ -0.39
SF3A1-209ENST00000496189 C20orf85Q9H1P6 137 aa12.61□□□□□ -0.39
SF3A1-209ENST00000496189 FLVCR2Q9UPI3 526 aa12.61□□□□□ -0.39
SF3A1-209ENST00000496189 A0A0B4J293 547 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 A0A1B0GW64 132 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 IGLC7A0M8Q6 106 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 CGB1A6NKQ9 187 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 OR4E1P0C645 316 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 SULT1A3P0DMM9 295 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 SULT1A4P0DMN0 295 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 ERHP84090 104 aaKnown RBP12.6□□□□□ -0.39
SF3A1-209ENST00000496189 IZUMO4Q1ZYL8 232 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 OR10W1Q8NGF6 305 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 COQ8AQ8NI60 647 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 PLEKHA3Q9HB20 300 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 ENY2Q9NPA8 101 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 PEMTQ9UBM1 199 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 TBC1D24Q9ULP9 559 aa12.6□□□□□ -0.39
SF3A1-209ENST00000496189 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.59□□□□□ -0.39
SF3A1-209ENST00000496189 TRBV7-1A0A0A6YYK4 115 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 C9orf170A2RU37 121 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 DBX1A6NMT0 343 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 LY86O95711 162 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 ANXA7P20073 488 aaKnown RBP12.59□□□□□ -0.39
SF3A1-209ENST00000496189 PRCDQ00LT1 54 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 DEFB121Q5J5C9 76 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 ACSM6Q6P461 480 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 LYZL2Q7Z4W2 148 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 LYG2Q86SG7 212 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 LRTM2Q8N967 370 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 GPR146Q96CH1 333 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 NUDT15Q9NV35 164 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 PRR13Q9NZ81 148 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 CACNG5Q9UF02 275 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 TMED3Q9Y3Q3 217 aa12.59□□□□□ -0.39
SF3A1-209ENST00000496189 TRAV6A0A075B6T7 132 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 A0A0G2JRQ6 117 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 H2AFB2P0C5Z0 115 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 SYNJ2BPP57105 145 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 KRTAP10-11P60412 298 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 SPCS3P61009 180 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 WT1-ASQ06250 92 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 DHRS2Q13268 280 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 SLC25A24Q6NUK1 477 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 OR52E5Q8NH55 327 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 FANCD2OSQ96PS1 177 aa12.58□□□□□ -0.4
SF3A1-209ENST00000496189 IGLV11-55A0A075B6I3 123 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 A0A1B0GU03 582 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 GGCTO75223 188 aaKnown RBP12.57□□□□□ -0.4
SF3A1-209ENST00000496189 NDUFB8O95169 186 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 ARL3P36405 182 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 SNCAP37840 140 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
SF3A1-209ENST00000496189 KLF5Q13887 457 aaPredicted RBP12.57□□□□□ -0.4
SF3A1-209ENST00000496189 SMCO1Q147U7 214 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 ANKRD55Q3KP44 614 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 Q6ZRM9 215 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 C19orf35Q6ZS72 473 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 OR9G4Q8NGQ1 327 aa12.57□□□□□ -0.4
SF3A1-209ENST00000496189 ZNF256Q9Y2P7 627 aaPredicted RBP12.57□□□□□ -0.4
SF3A1-209ENST00000496189 F11RQ9Y624 299 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms