RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 TMEM56-RWDD3S4R434 201 aa2.08□□□□□ -2.08
SSR3-208ENST00000496050 SMARCA4P51532 1647 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 FAAHO00519 579 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 CIAO1O76071 339 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 IGKV1-5P01602 117 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 TTRP02766 147 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 GPX2P18283 190 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 RPS4Y1P22090 263 aaKnown RBP2.07□□□□□ -2.08
SSR3-208ENST00000496050 AKR1C3P42330 323 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 FXYD2P54710 66 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 FADDQ13158 208 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 STX5Q13190 355 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 EDDM3AQ14507 147 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 Q6ZRN7 208 aaPredicted RBP2.07□□□□□ -2.08
SSR3-208ENST00000496050 C7orf65Q6ZTY9 151 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 MBD3L1Q8WWY6 194 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 BORCS7Q96B45 105 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 TRIM4Q9C037 500 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 GLTPQ9NZD2 209 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 MALRD1Q5VYJ5 2156 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 CPAMD8Q8IZJ3 1885 aa2.07□□□□□ -2.08
SSR3-208ENST00000496050 EXOC1LA0A1B0GW35 172 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 SMIM9A6NGZ8 99 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 OR4C46A6NHA9 309 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 ZNF737O75373 536 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 IFNA10P01566 189 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 METTL15P1P0C7V9 234 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 ZNF80P51504 273 aaPredicted RBP2.06□□□□□ -2.08
SSR3-208ENST00000496050 CCL7P80098 99 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 ELOBQ15370 118 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 SPA17Q15506 151 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 ZNF563Q8TA94 476 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 RASSF5Q8WWW0 418 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 C11orf40Q8WZ69 217 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 TOMM6Q96B49 74 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 NIPSNAP1Q9BPW8 284 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 TMEM147Q9BVK8 224 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 KIAA2026Q5HYC2 2103 aa2.06□□□□□ -2.08
SSR3-208ENST00000496050 GREB1Q4ZG55 1949 aa2.05□□□□□ -2.08
SSR3-208ENST00000496050 TRAV9-1A0A075B6T8 112 aa2.05□□□□□ -2.08
SSR3-208ENST00000496050 TRAV26-2A0A0B4J265 109 aa2.05□□□□□ -2.08
SSR3-208ENST00000496050 PIRO00625 290 aa2.05□□□□□ -2.08
SSR3-208ENST00000496050 SUPT4H1P63272 117 aaKnown RBP2.05□□□□□ -2.08
SSR3-208ENST00000496050 ARHGAP11BQ3KRB8 267 aa2.05□□□□□ -2.08
SSR3-208ENST00000496050 SCGB3A1Q96QR1 104 aa2.05□□□□□ -2.08
SSR3-208ENST00000496050 DCSTAMPQ9H295 470 aa2.05□□□□□ -2.08
SSR3-208ENST00000496050 C11orf68Q9H3H3 251 aaKnown RBP2.05□□□□□ -2.08
SSR3-208ENST00000496050 AMMECR1Q9Y4X0 333 aaPredicted RBP2.05□□□□□ -2.08
SSR3-208ENST00000496050 MAST2Q6P0Q8 1798 aa2.05□□□□□ -2.08
SSR3-208ENST00000496050 IGKV1D-43A0A0B4J1Z2 117 aa2.04□□□□□ -2.08
SSR3-208ENST00000496050 SDCBPO00560 298 aaPredicted RBP2.04□□□□□ -2.08
SSR3-208ENST00000496050 PIK3C2GO75747 1445 aa2.04□□□□□ -2.08
SSR3-208ENST00000496050 MAGEA12P43365 314 aa2.04□□□□□ -2.08
SSR3-208ENST00000496050 AP3S2P59780 193 aa2.04□□□□□ -2.08
SSR3-208ENST00000496050 RPS20P60866 119 aaKnown RBP2.04□□□□□ -2.08
SSR3-208ENST00000496050 TMEM97Q5BJF2 176 aa2.04□□□□□ -2.08
SSR3-208ENST00000496050 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
SSR3-208ENST00000496050 TOPBP1Q92547 1522 aa2.04□□□□□ -2.08
SSR3-208ENST00000496050 NAA38Q9BRA0 125 aaKnown RBP2.04□□□□□ -2.08
SSR3-208ENST00000496050 HECW2Q9P2P5 1572 aa2.04□□□□□ -2.08
SSR3-208ENST00000496050 PTPRBP23467 1997 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 COL4A1P02462 1669 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 FAM236DA0A1B0GTK5 79 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 FADS1O60427 444 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 CNIH1O95406 144 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 CRPP02741 224 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 RBP1P09455 135 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 FAM236CP0DP71 79 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 HIST1H3AP68431 136 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 H3F3AP84243 136 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 CDK10Q15131 360 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 MOGQ16653 247 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 AKIRIN2Q53H80 203 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 FAM173BQ6P4H8 233 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 RPS19BP1Q86WX3 136 aaKnown RBP2.03□□□□□ -2.08
SSR3-208ENST00000496050 DHFR2Q86XF0 187 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 KRT222Q8N1A0 295 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 OR8B3Q8NGG8 313 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 TLNRD1Q9H1K6 362 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 CKLFQ9UBR5 152 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 TP73-AS1Q9UF72 201 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 BAIAP2Q9UQB8 552 aa2.03□□□□□ -2.08
SSR3-208ENST00000496050 SORL1Q92673 2214 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 KIF24Q5T7B8 1368 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 TMEM210A6NLX4 147 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 CTXN2P0C2S0 81 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 REEP5Q00765 189 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 IAH1Q2TAA2 248 aaPredicted RBP2.02□□□□□ -2.09
SSR3-208ENST00000496050 AAED1Q7RTV5 226 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 OR6V1Q8N148 313 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 CT55Q8WUE5 264 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 H1FXQ92522 213 aaKnown RBP2.02□□□□□ -2.09
SSR3-208ENST00000496050 TMEM106AQ96A25 262 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 CHMP6Q96FZ7 201 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 GINS4Q9BRT9 223 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 CCDC90BQ9GZT6 254 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 KIF13BQ9NQT8 1826 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 FN1P02751 2386 aaKnown RBP2.02□□□□□ -2.09
SSR3-208ENST00000496050 NUMA1Q14980 2115 aa2.02□□□□□ -2.09
SSR3-208ENST00000496050 ZFYVE9O95405 1425 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms