RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	MFSD2B	A6NFX1	497 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	PPP5D1	E7EU14	171 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	CYB5B	O43169	146 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	HLA-A	P01891	365 aa	Known RBP	7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	ANXA3	P12429	323 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	ZP3	P21754	424 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	SYNJ2BP	P57105	145 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	KRTAP10-11	P60412	298 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	PRCD	Q00LT1	54 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	RBMS2	Q15434	407 aa	Known RBP	7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	RPEL1	Q2QD12	228 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	KPRP	Q5T749	579 aa	Predicted RBP	7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	C9orf66	Q5T8R8	295 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	LYZL2	Q7Z4W2	148 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	CENPS	Q8N2Z9	138 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	SLC35G3	Q8N808	338 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	EEF1AKMT3	Q96AZ1	226 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	GALNT14	Q96FL9	552 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	GPR61	Q9BZJ8	451 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	PLEKHA3	Q9HB20	300 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	ZC4H2	Q9NQZ6	224 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	FLVCR2	Q9UPI3	526 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	DMRT1	Q9Y5R6	373 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	F11R	Q9Y624	299 aa	Known RBP	7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	TMEM56-RWDD3	S4R434	201 aa		7.55	□□□□□ -1.2
CALD1-223	ENST00000496024	PRKDC	P78527	4128 aa	Known RBP	7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	BMPR1B	O00238	502 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	PLA2G10	O15496	165 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	SAP30	O75446	220 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	NDUFB6	O95139	128 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	BTC	P35070	178 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	HOXA1	P49639	335 aa	Predicted RBP	7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	MFAP2	P55001	183 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	ERH	P84090	104 aa	Known RBP	7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	PPP1R1A	Q13522	171 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	ANKRD55	Q3KP44	614 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	TMEM128	Q5BJH2	165 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	CLEC19A	Q6UXS0	136 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	ZNF429	Q86V71	674 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	FAM219A	Q8IW50	185 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	LGI3	Q8N145	548 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	S100Z	Q8WXG8	99 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	MISP3	Q96FF7	219 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	C7orf50	Q9BRJ6	194 aa	Known RBP	7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	ENY2	Q9NPA8	101 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	THYN1	Q9P016	225 aa		7.54	□□□□□ -1.2
CALD1-223	ENST00000496024	LYRM1	O43325	122 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	OR2C1	O95371	312 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	SFT2D2	O95562	160 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	ARL3	P36405	182 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	SNCA	P37840	140 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	KLF5	Q13887	457 aa	Predicted RBP	7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	ZNF846	Q147U1	533 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	LINC00299	Q6ZSB3	139 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	HAPLN4	Q86UW8	402 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	OR2C3	Q8N628	320 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	IL22RA2	Q969J5	263 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	CXorf58	Q96LI9	332 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	CCDC140	Q96MF4	163 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	CCDC32	Q9BV29	185 aa		7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	7.53	□□□□□ -1.2
CALD1-223	ENST00000496024	TRBV7-1	A0A0A6YYK4	115 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024		A0A0B4J2A0	478 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	IGHV3-35	A0A0C4DH35	117 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	WI2-2373I1.2	A0A1W2PRP0	233 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	CEBPZOS	A8MTT3	80 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	GGCT	O75223	188 aa	Known RBP	7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	IGHV3-48	P01763	117 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	CLEC3B	P05452	202 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	HOXB5	P09067	269 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	SULT1A3	P0DMM9	295 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	SULT1A4	P0DMN0	295 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	ANXA7	P20073	488 aa	Known RBP	7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	GPR183	P32249	361 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	SPCS3	P61009	180 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	SRPX	P78539	464 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	TATDN3	Q17R31	274 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	KLK9	Q2XQG4	91 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	UBAC2	Q8NBM4	344 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	OR1P1	Q8NH06	330 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	PINX1	Q96BK5	328 aa	Known RBP	7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	OR4C12	Q96R67	309 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	ELOVL1	Q9BW60	279 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	WDR12	Q9GZL7	423 aa	Known RBP	7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	HEYL	Q9NQ87	328 aa	Predicted RBP	7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	SHPK	Q9UHJ6	478 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	KLK9	Q9UKQ9	250 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	TG	P01266	2768 aa		7.52	□□□□□ -1.21
CALD1-223	ENST00000496024	TRAV6	A0A075B6T7	132 aa		7.51	□□□□□ -1.21
CALD1-223	ENST00000496024	C9orf170	A2RU37	121 aa		7.51	□□□□□ -1.21
CALD1-223	ENST00000496024	OR2T8	A6NH00	312 aa		7.51	□□□□□ -1.21
CALD1-223	ENST00000496024		K7EIM0	57 aa		7.51	□□□□□ -1.21
CALD1-223	ENST00000496024	WIPF1	O43516	503 aa		7.51	□□□□□ -1.21
CALD1-223	ENST00000496024	LY86	O95711	162 aa		7.51	□□□□□ -1.21
CALD1-223	ENST00000496024	OR4E1	P0C645	316 aa		7.51	□□□□□ -1.21
CALD1-223	ENST00000496024	UBE2M	P61081	183 aa	Known RBP	7.51	□□□□□ -1.21
CALD1-223	ENST00000496024	EGFEM1P	Q0D2K5	195 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms