RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 CHRDL1Q9BU40 450 aa13.72□□□□□ -0.21
CLCNKA-207ENST00000495784 UBQLN2Q9UHD9 624 aa13.72□□□□□ -0.21
CLCNKA-207ENST00000495784 HYDINQ4G0P3 5121 aa13.71□□□□□ -0.21
CLCNKA-207ENST00000495784 IGHV3OR16-8A0A075B7F1 116 aa13.71□□□□□ -0.21
CLCNKA-207ENST00000495784 A0A087WXM4 84 aa13.71□□□□□ -0.21
CLCNKA-207ENST00000495784 SMIM31A0A1B0GVY4 71 aa13.71□□□□□ -0.21
CLCNKA-207ENST00000495784 K7EIM0 57 aa13.71□□□□□ -0.21
CLCNKA-207ENST00000495784 EIF4EP06730 217 aaKnown RBP13.71□□□□□ -0.21
CLCNKA-207ENST00000495784 SLC25A46Q96AG3 418 aa13.71□□□□□ -0.21
CLCNKA-207ENST00000495784 OR4C46A6NHA9 309 aa13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 DBX1A6NMT0 343 aa13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 C15orf61A6NNL5 157 aa13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 K7EMT4 169 aa13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 ZNF207O43670 478 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 ADMP35318 185 aa13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 OR1P1Q8NH06 330 aa13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 GPX8Q8TED1 209 aa13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 TMEM14BQ9NUH8 114 aa13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 COMMD3Q9UBI1 195 aa13.7□□□□□ -0.22
CLCNKA-207ENST00000495784 PLECQ15149 4684 aaKnown RBP13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 BIRC6Q9NR09 4857 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 CXorf65A6NEN9 183 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 C15orf62A8K5M9 175 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 F8W735 103 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 APOA1P02647 267 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 Q6ZWC4 215 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 H2BFWTQ7Z2G1 175 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 TBC1D26Q86UD7 250 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 SNX29P2Q8IUI4 249 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 OR4A16Q8NH70 328 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 MISP3Q96FF7 219 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 SCPEP1Q9HB40 452 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 FAM212BQ9NTI7 297 aaPredicted RBP13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 TP53TG1Q9Y2A0 90 aa13.69□□□□□ -0.22
CLCNKA-207ENST00000495784 UBE2CO00762 179 aa13.68□□□□□ -0.22
CLCNKA-207ENST00000495784 NUPL2O15504 423 aaKnown RBP13.68□□□□□ -0.22
CLCNKA-207ENST00000495784 SPRY2O43597 315 aa13.68□□□□□ -0.22
CLCNKA-207ENST00000495784 TNFAIP8O95379 198 aa13.68□□□□□ -0.22
CLCNKA-207ENST00000495784 BMI1P35226 326 aa13.68□□□□□ -0.22
CLCNKA-207ENST00000495784 RCVRNP35243 200 aa13.68□□□□□ -0.22
CLCNKA-207ENST00000495784 RELQ04864 619 aaPredicted RBP13.68□□□□□ -0.22
CLCNKA-207ENST00000495784 DEFB135Q30KP9 77 aa13.68□□□□□ -0.22
CLCNKA-207ENST00000495784 ODF3L2Q3SX64 289 aa13.68□□□□□ -0.22
CLCNKA-207ENST00000495784 A0A0J9YWU9 116 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 YIF1AO95070 293 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 CTSDP07339 412 aaPredicted RBP13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 CTSGP08311 255 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 MFAP4P55083 255 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 NCS1P62166 190 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 PMS2P11Q13670 270 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 WFDC3Q8IUB2 231 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 STPG3Q8N7X2 389 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 CMTM3Q96MX0 182 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 SMPXQ9UHP9 88 aa13.67□□□□□ -0.22
CLCNKA-207ENST00000495784 ALMS1Q8TCU4 4167 aa13.66□□□□□ -0.22
CLCNKA-207ENST00000495784 KIR2DL5BA0A0G2JN68 375 aa13.66□□□□□ -0.22
CLCNKA-207ENST00000495784 KIR2DL5BA0A0G2JPC4 375 aa13.66□□□□□ -0.22
CLCNKA-207ENST00000495784 RPL35AP18077 110 aaKnown RBP13.66□□□□□ -0.22
CLCNKA-207ENST00000495784 LYG2Q86SG7 212 aa13.66□□□□□ -0.22
CLCNKA-207ENST00000495784 KIR2DL5AQ8N109 375 aa13.66□□□□□ -0.22
CLCNKA-207ENST00000495784 KIR2DL5BQ8NHK3 375 aa13.66□□□□□ -0.22
CLCNKA-207ENST00000495784 MRGPRFQ96AM1 343 aa13.66□□□□□ -0.22
CLCNKA-207ENST00000495784 SEC22AQ96IW7 307 aa13.66□□□□□ -0.22
CLCNKA-207ENST00000495784 I3L2K1 104 aa13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 UCP3P55916 312 aa13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 PRCDQ00LT1 54 aa13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 TMEM116Q8NCL8 245 aa13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 PINX1Q96BK5 328 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 RNF2Q99496 336 aa13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 TXN2Q99757 166 aa13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 FUNDC2Q9BWH2 189 aa13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 RHPN1-AS1Q9BWJ2 59 aa13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 C6orf62Q9GZU0 229 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-207ENST00000495784 IGHV3-49A0A0A0MS15 119 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 IGHV7-4-1A0A0J9YVY3 117 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 NUPR2A6NF83 97 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 HPGDSO60760 199 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 MT-CO2P00403 227 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 IGKV1-39P01597 117 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 IGKV1D-39P04432 117 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 ELK1P19419 428 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 FCGR2BP31994 310 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 HSPE1P61604 102 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 VBP1P61758 197 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 ERHP84090 104 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 TNFRSF9Q07011 255 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 ZNF114Q8NC26 417 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 GALNT14Q96FL9 552 aa13.64□□□□□ -0.23
CLCNKA-207ENST00000495784 M0QYG6 137 aa13.63□□□□□ -0.23
CLCNKA-207ENST00000495784 CHEK1O14757 476 aa13.63□□□□□ -0.23
CLCNKA-207ENST00000495784 GNG7O60262 68 aa13.63□□□□□ -0.23
CLCNKA-207ENST00000495784 IGHV3-48P01763 117 aa13.63□□□□□ -0.23
CLCNKA-207ENST00000495784 PGAM2P15259 253 aa13.63□□□□□ -0.23
CLCNKA-207ENST00000495784 TFPI2P48307 235 aa13.63□□□□□ -0.23
CLCNKA-207ENST00000495784 RNF183Q96D59 192 aa13.63□□□□□ -0.23
CLCNKA-207ENST00000495784 OR10C1Q96KK4 312 aa13.63□□□□□ -0.23
CLCNKA-207ENST00000495784 NXF2Q9GZY0 626 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-207ENST00000495784 IGKV3-7A0A075B6H7 116 aa13.62□□□□□ -0.23
CLCNKA-207ENST00000495784 TRAV14DV4A0A0A6YYC5 116 aa13.62□□□□□ -0.23
CLCNKA-207ENST00000495784 FAM25AB3EWG3 89 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms