RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, human

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-221	ENST00000495755	RBMY1E	A6NEQ0	496 aa	Known RBP	5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	OR2T8	A6NH00	312 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	OR11H12	B2RN74	326 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755		F8W735	103 aa	Predicted RBP	5.41	□□□□□ -1.54
VPS52-221	ENST00000495755		K7EIM0	57 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	CD74	P04233	296 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	CD3D	P04234	171 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	IFNA6	P05013	189 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	RBMY1D	P0C7P1	496 aa	Known RBP	5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	LYL1	P12980	280 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	TBP	P20226	339 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	RNASE10	Q5GAN6	216 aa	Known RBP	5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	SPSB3	Q6PJ21	355 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	ARRDC1	Q8N5I2	433 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	TMEM229B	Q8NBD8	167 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	OR1L6	Q8NGR2	347 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	OR1P1	Q8NH06	330 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	TMEM190	Q8WZ59	177 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	BSCL2	Q96G97	398 aa	Predicted RBP	5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	ZNF486	Q96H40	463 aa	Predicted RBP	5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	TMEM56	Q96MV1	263 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	MRPS26	Q9BYN8	205 aa	Known RBP	5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	WFDC10A	Q9H1F0	79 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	HIPK2	Q9H2X6	1198 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	PALMD	Q9NP74	551 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	C21orf62	Q9NYP8	219 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	MRPL27	Q9P0M9	148 aa	Known RBP	5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	EXTL2	Q9UBQ6	330 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	UFC1	Q9Y3C8	167 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	CEPT1	Q9Y6K0	416 aa		5.41	□□□□□ -1.54
VPS52-221	ENST00000495755	IGHV3-21	A0A0B4J1V1	117 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	IGHV3-35	A0A0C4DH35	117 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755		I3L2K1	104 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	NDUFA4	O00483	81 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	CTDSP2	O14595	271 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	IGKV1-5	P01602	117 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	CTSG	P08311	255 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755		P0C879	139 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	PI3	P19957	117 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	FCGR2B	P31994	310 aa	Predicted RBP	5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	ADM	P35318	185 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	HSPE1	P61604	102 aa	Known RBP	5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	PRCD	Q00LT1	54 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	SPCS2	Q15005	226 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	RNASE12	Q5GAN4	147 aa	Known RBP	5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	BTNL8	Q6UX41	500 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	SLC16A13	Q7RTY0	426 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	H2BFWT	Q7Z2G1	175 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	GPR141	Q7Z602	305 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	OR2C3	Q8N628	320 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	ZNF114	Q8NC26	417 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	OR4D10	Q8NGI6	311 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	OR4A16	Q8NH70	328 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	TERB2	Q8NHR7	220 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	C15orf40	Q8WUR7	153 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	MRGPRF	Q96AM1	343 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	ZNF414	Q96IQ9	312 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	TP53RK	Q96S44	253 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	CHRDL1	Q9BU40	450 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	C5orf66	Q9H5L9	145 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	SRD5A3	Q9H8P0	318 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755	RETN	Q9HD89	108 aa		5.4	□□□□□ -1.54
VPS52-221	ENST00000495755		A0A0B4J293	547 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	C3orf85	A0A1B0GTC6	90 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	C15orf62	A8K5M9	175 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	INS-IGF2	F8WCM5	200 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	GABARAP	H6UMI1	98 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755		K7EMT4	169 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	SCAF4	O95104	1147 aa	Known RBP	5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	PGAM2	P15259	253 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	PIGP	P57054	158 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	TAS2R19	P59542	299 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	SSBP1	Q04837	148 aa	Known RBP	5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	IZUMO4	Q1ZYL8	232 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	ANKRD55	Q3KP44	614 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	PVRIG	Q6DKI7	326 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	STEAP1B	Q6NZ63	245 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	OR52B4	Q8NGK2	314 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	ZFAND1	Q8TCF1	268 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	ISOC1	Q96CN7	298 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	TXN2	Q99757	166 aa		5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	DAZ1	Q9NQZ3	744 aa	Known RBP	5.39	□□□□□ -1.55
VPS52-221	ENST00000495755	TSPAN4	O14817	238 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	RGS5	O15539	181 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	RAB3D	O95716	219 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	CTSD	P07339	412 aa	Predicted RBP	5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	UCP1	P25874	307 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	PPP5C	P53041	499 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	TMBIM6	P55061	237 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	MFAP4	P55083	255 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	MRPS10	P82664	201 aa	Known RBP	5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	ERH	P84090	104 aa	Known RBP	5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	SP6	Q3SY56	376 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755		Q56UQ5	140 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	ZFAND6	Q6FIF0	208 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	CLVS1	Q8IUQ0	354 aa	Predicted RBP	5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	UBAC2	Q8NBM4	344 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	OR13C8	Q8NGS7	320 aa		5.38	□□□□□ -1.55
VPS52-221	ENST00000495755	MARCH1	Q8TCQ1	289 aa		5.38	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms