RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 C19orf35Q6ZS72 473 aa12.39□□□□□ -0.43
PHF1-211ENST00000495509 OR2C3Q8N628 320 aa12.39□□□□□ -0.43
PHF1-211ENST00000495509 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
PHF1-211ENST00000495509 ARPC1AQ92747 370 aa12.39□□□□□ -0.43
PHF1-211ENST00000495509 HIPK2Q9H2X6 1198 aa12.39□□□□□ -0.43
PHF1-211ENST00000495509 ENY2Q9NPA8 101 aa12.39□□□□□ -0.43
PHF1-211ENST00000495509 LYRM2Q9NU23 88 aaPredicted RBP12.39□□□□□ -0.43
PHF1-211ENST00000495509 CACFD1Q9UGQ2 172 aa12.39□□□□□ -0.43
PHF1-211ENST00000495509 RPL12P30050 165 aaKnown RBP12.38□□□□□ -0.43
PHF1-211ENST00000495509 RPL23AP62750 156 aaKnown RBP12.38□□□□□ -0.43
PHF1-211ENST00000495509 NHLH2Q02577 135 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 TMEM267Q0VDI3 215 aaPredicted RBP12.38□□□□□ -0.43
PHF1-211ENST00000495509 ZNF345Q14585 488 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 C16orf82Q7Z2V1 217 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 TMEM252Q8N6L7 170 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 ABHD5Q8WTS1 349 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 CIB3Q96Q77 187 aaPredicted RBP12.38□□□□□ -0.43
PHF1-211ENST00000495509 ANKRD34BA5PLL1 514 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 DNAJC9-AS1A6NH13 148 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 C15orf62A8K5M9 175 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 IFNA10P01566 189 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 METTL15P1P0C7V9 234 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 TAS2R30P59541 319 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 OR2F1Q13607 317 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 CLLU1Q5K131 121 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 ASPHD1Q5U4P2 390 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 ACOT7LQ6ZUV0 252 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 KCNRGQ8N5I3 272 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 INO80EQ8NBZ0 244 aaPredicted RBP12.38□□□□□ -0.43
PHF1-211ENST00000495509 PARP11Q9NR21 331 aa12.38□□□□□ -0.43
PHF1-211ENST00000495509 A0A1W2PN81 502 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 LINC00862A6NCI5 91 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 M0QZK8 103 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 ATP6V0E1O15342 81 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 GPR137BO60478 399 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 CST7O76096 145 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 CHRNA7P36544 502 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 SLC51BQ86UW2 128 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 LFNGQ8NES3 379 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 TAF15Q92804 592 aaKnown RBP eCLIP12.37□□□□□ -0.43
PHF1-211ENST00000495509 CITED4Q96RK1 184 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 LINC00527Q9UJ94 153 aa12.37□□□□□ -0.43
PHF1-211ENST00000495509 NIPBLQ6KC79 2804 aaeCLIP12.37□□□□□ -0.43
PHF1-211ENST00000495509 RPS10-NUDT3A0A1W2PQS6 291 aa12.36□□□□□ -0.43
PHF1-211ENST00000495509 KANTRA0A1W2PQU2 76 aa12.36□□□□□ -0.43
PHF1-211ENST00000495509 ERHP84090 104 aaKnown RBP12.36□□□□□ -0.43
PHF1-211ENST00000495509 ARL16Q0P5N6 197 aa12.36□□□□□ -0.43
PHF1-211ENST00000495509 TMEM14EPQ6UXP3 125 aa12.36□□□□□ -0.43
PHF1-211ENST00000495509 AQP10Q96PS8 301 aa12.36□□□□□ -0.43
PHF1-211ENST00000495509 STRAPQ9Y3F4 350 aaKnown RBP12.36□□□□□ -0.43
PHF1-211ENST00000495509 INS-IGF2F8WCM5 200 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 RNASE2P10153 161 aaKnown RBP12.35□□□□□ -0.43
PHF1-211ENST00000495509 EWSR1Q01844 656 aaKnown RBP eCLIP12.35□□□□□ -0.43
PHF1-211ENST00000495509 SCGB2A2Q13296 93 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 HAPLN4Q86UW8 402 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 TMEM86BQ8N661 226 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 P2RX4Q99571 388 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 ZC4H2Q9NQZ6 224 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 G3V318 75 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 BCL2L11O43521 198 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 CRLF1O75462 422 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 IGHG2P01859 326 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 NUP62P37198 522 aaPredicted RBP12.35□□□□□ -0.43
PHF1-211ENST00000495509 SNCAP37840 140 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 MFAP2P55001 183 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 UBA52P62987 128 aaKnown RBP12.35□□□□□ -0.43
PHF1-211ENST00000495509 BSXQ3C1V8 233 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 TMEM217Q8N7C4 229 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 SLC24A4Q8NFF2 622 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 SGMS2Q8NHU3 365 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 SCARB1Q8WTV0 552 aa12.35□□□□□ -0.43
PHF1-211ENST00000495509 PCNPQ8WW12 178 aaKnown RBP12.35□□□□□ -0.43
PHF1-211ENST00000495509 PMS2P5A8MQ11 134 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 NPY1RP25929 384 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 ECSCRQ19T08 205 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 TMEM95Q3KNT9 176 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 OR8G2PQ6IF36 304 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 ALKAL2Q6UX46 152 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 SLC35E3Q7Z769 313 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 OR5T1Q8NG75 326 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 ZNF418Q8TF45 676 aaPredicted RBP12.34□□□□□ -0.43
PHF1-211ENST00000495509 NOL4LQ96MY1 436 aaPredicted RBP12.34□□□□□ -0.43
PHF1-211ENST00000495509 SMIM3Q9BZL3 60 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 DMRT1Q9Y5R6 373 aa12.34□□□□□ -0.43
PHF1-211ENST00000495509 FAM181BA6NEQ2 426 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 PRH1P02810 166 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 FAM157CP0CG43 387 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 SRSF8Q9BRL6 282 aaKnown RBP12.33□□□□□ -0.44
PHF1-211ENST00000495509 LY86O95711 162 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 OR8U8P0C7N1 319 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 CTRB1P17538 263 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 SULT1A1P50225 295 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 HILS1P60008 231 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 MLANAQ16655 118 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 C2orf83Q53S99 150 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 CTRB2Q6GPI1 263 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 UNQ5815/PRO19632Q6UWF5 114 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 ETV3LQ6ZN32 361 aa12.33□□□□□ -0.44
PHF1-211ENST00000495509 ST8SIA2Q92186 375 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms