RNA–Protein interactions for RNA: ENST00000495423.1

SIMC1-208, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 2

Gene SIMC1, Length 913 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-208ENST00000495423 IGKV1D-39P04432 117 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 MECP2P51608 486 aaKnown RBP17.56■□□□□ 0.4
SIMC1-208ENST00000495423 TMEM187Q14656 261 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 TRIM16LQ309B1 348 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 GTSCR1Q86UQ5 136 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 VKORC1L1Q8N0U8 176 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 LRTM2Q8N967 370 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 DUSP18Q8NEJ0 188 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 SPIN2AQ99865 258 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 SPIN2BQ9BPZ2 258 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 SRSF8Q9BRL6 282 aaKnown RBP17.56■□□□□ 0.4
SIMC1-208ENST00000495423 CACFD1Q9UGQ2 172 aa17.56■□□□□ 0.4
SIMC1-208ENST00000495423 SNAPC5O75971 98 aa17.55■□□□□ 0.4
SIMC1-208ENST00000495423 HLA-GP17693 338 aa17.55■□□□□ 0.4
SIMC1-208ENST00000495423 SSBP2P81877 361 aaPredicted RBP17.55■□□□□ 0.4
SIMC1-208ENST00000495423 PJVKQ0ZLH3 352 aa17.55■□□□□ 0.4
SIMC1-208ENST00000495423 SSX9Q7RTT3 188 aa17.55■□□□□ 0.4
SIMC1-208ENST00000495423 H2BFWTQ7Z2G1 175 aa17.55■□□□□ 0.4
SIMC1-208ENST00000495423 LSM10Q969L4 123 aaKnown RBP17.55■□□□□ 0.4
SIMC1-208ENST00000495423 C20orf85Q9H1P6 137 aa17.55■□□□□ 0.4
SIMC1-208ENST00000495423 SIGLEC8Q9NYZ4 499 aa17.55■□□□□ 0.4
SIMC1-208ENST00000495423 PRNDQ9UKY0 176 aa17.55■□□□□ 0.4
SIMC1-208ENST00000495423 C13orf42A0A1B0GVH6 325 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 SFT2D2O95562 160 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 P0C879 139 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 G6PCP35575 357 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 SP6Q3SY56 376 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 LCN12Q6JVE5 192 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 LINC00322Q6ZN03 302 aaPredicted RBP17.54■□□□□ 0.4
SIMC1-208ENST00000495423 LGI3Q8N145 548 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 ENKURQ8TC29 256 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 RRNAD1Q96FB5 475 aaKnown RBP17.54■□□□□ 0.4
SIMC1-208ENST00000495423 CLCC1Q96S66 551 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 HIPK2Q9H2X6 1198 aa17.54■□□□□ 0.4
SIMC1-208ENST00000495423 FRAS1Q86XX4 4008 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 A0A0B4J2A0 478 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 A0A0G2JLM5 398 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 BRI3O95415 125 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 AKR1C2P52895 323 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 TNXAQ16473 311 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 HSD17B13Q7Z5P4 300 aaPredicted RBP17.53■□□□□ 0.4
SIMC1-208ENST00000495423 SELENOHQ8IZQ5 122 aaKnown RBP17.53■□□□□ 0.4
SIMC1-208ENST00000495423 OR5B3Q8NH48 314 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 SRSF12Q8WXF0 261 aaKnown RBP17.53■□□□□ 0.4
SIMC1-208ENST00000495423 COMMD5Q9GZQ3 224 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 RETNQ9HD89 108 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 SHPKQ9UHJ6 478 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 ZNF257Q9Y2Q1 563 aa17.53■□□□□ 0.4
SIMC1-208ENST00000495423 OR4E1P0C645 316 aa17.52■□□□□ 0.4
SIMC1-208ENST00000495423 TMEM14BQ9NUH8 114 aa17.52■□□□□ 0.4
SIMC1-208ENST00000495423 NUDT15Q9NV35 164 aa17.52■□□□□ 0.4
SIMC1-208ENST00000495423 ANKRD34BA5PLL1 514 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 C15orf61A6NNL5 157 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 IGKV1-5P01602 117 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 CSN3P07498 182 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 VAMP1P23763 118 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 RPL27AP46776 148 aaKnown RBP17.51■□□□□ 0.39
SIMC1-208ENST00000495423 SYNJ2BPP57105 145 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 PPP1R1AQ13522 171 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 AARDQ4LEZ3 155 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 TMEM268Q5VZI3 342 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 LYG2Q86SG7 212 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 ZNF355PQ9NSJ1 428 aa17.51■□□□□ 0.39
SIMC1-208ENST00000495423 C9orf170A2RU37 121 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 H2AFB2P0C5Z0 115 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 DHRS2Q13268 280 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 OR1L8Q8NGR8 309 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 OR4A16Q8NH70 328 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 GRPEL2Q8TAA5 225 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 LHFPL5Q8TAF8 219 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 FAM110AQ9BQ89 295 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 COA4Q9NYJ1 87 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 FLVCR2Q9UPI3 526 aa17.5■□□□□ 0.39
SIMC1-208ENST00000495423 IZUMO1RA6ND01 250 aa17.49■□□□□ 0.39
SIMC1-208ENST00000495423 HLA-AP01891 365 aaKnown RBP17.49■□□□□ 0.39
SIMC1-208ENST00000495423 OR5T1Q8NG75 326 aa17.49■□□□□ 0.39
SIMC1-208ENST00000495423 QTRT1Q9BXR0 403 aaKnown RBP17.49■□□□□ 0.39
SIMC1-208ENST00000495423 MSGN1A6NI15 193 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 PTTG1O95997 202 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 OR9G9P0C7N8 305 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 SLC25A6P12236 298 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 OR2B8PP59922 312 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 C4orf46Q504U0 113 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 ZNF343Q6P1L6 599 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 PLET1Q6UQ28 207 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 NRARPQ7Z6K4 114 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 OR2K2Q8NGT1 345 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 COQ8AQ8NI60 647 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 RNASE11Q8TAA1 199 aaKnown RBP17.48■□□□□ 0.39
SIMC1-208ENST00000495423 PEF1Q9UBV8 284 aaKnown RBP17.48■□□□□ 0.39
SIMC1-208ENST00000495423 TMED3Q9Y3Q3 217 aa17.48■□□□□ 0.39
SIMC1-208ENST00000495423 TRAV3A0A0B4J244 114 aa17.47■□□□□ 0.39
SIMC1-208ENST00000495423 IL5P05113 134 aa17.47■□□□□ 0.39
SIMC1-208ENST00000495423 ANXA7P20073 488 aaKnown RBP17.47■□□□□ 0.39
SIMC1-208ENST00000495423 TATDN3Q17R31 274 aa17.47■□□□□ 0.39
SIMC1-208ENST00000495423 NMSQ5H8A3 153 aa17.47■□□□□ 0.39
SIMC1-208ENST00000495423 TTC9CQ8N5M4 171 aa17.47■□□□□ 0.39
SIMC1-208ENST00000495423 SLC35G3Q8N808 338 aa17.47■□□□□ 0.39
SIMC1-208ENST00000495423 PHB2Q99623 299 aa17.47■□□□□ 0.39
SIMC1-208ENST00000495423 MARVELD1Q9BSK0 173 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms