RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 SLC17A3O00476 420 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 ACTL6BO94805 426 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 IGHV1-46P01743 117 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 OR10J4P0C629 311 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 CT45A6P0DMU7 189 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 CT45A5P0DMU8 189 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 CT45A7P0DMV0 189 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 ESDP10768 282 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 GNG4P50150 75 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 TPPP2P59282 170 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 ERVFC1-1P60608 527 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 MISP3Q96FF7 219 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 MRPL18Q9H0U6 180 aaKnown RBP12.16□□□□□ -0.46
UBXN11-215ENST00000494942 BET1LQ9NYM9 111 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 DSCAMO60469 2012 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 SPTBN2O15020 2390 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 MYOD1P15172 320 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 CRISP2P16562 243 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 CBLN1P23435 193 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 RANP62826 216 aaKnown RBP12.16□□□□□ -0.46
UBXN11-215ENST00000494942 USF2Q15853 346 aaPredicted RBP12.16□□□□□ -0.46
UBXN11-215ENST00000494942 C1orf194Q5T5A4 169 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 DUX4L9Q6RFH8 374 aaPredicted RBP12.16□□□□□ -0.46
UBXN11-215ENST00000494942 MMD2Q8IY49 270 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 OR1L8Q8NGR8 309 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 WFIKKN1Q96NZ8 548 aa12.16□□□□□ -0.46
UBXN11-215ENST00000494942 TEX50A0A1B0GTY4 177 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 NUPR1O60356 82 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 IRF2P14316 349 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 OR1L6Q8NGR2 347 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 CCL13Q99616 98 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 FAM215AQ9Y5M1 114 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 V9GYV3 84 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 PRRC2CQ9Y520 2896 aaKnown RBP12.15□□□□□ -0.46
UBXN11-215ENST00000494942 A0A1B0GUS0 222 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 hADV38S2A0JD32 116 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 OR5G3P0C626 314 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 CENPWQ5EE01 88 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 C1orf185Q5T7R7 199 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 IGF2-ASQ6U949 168 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 IGFL3Q6UXB1 125 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 DEFB108BQ8NET1 73 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 GNB1LQ9BYB4 327 aa12.15□□□□□ -0.46
UBXN11-215ENST00000494942 GRIFINA4D1Z8 144 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 FCN1O00602 326 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 COX19Q49B96 90 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 TEX36Q5VZQ5 186 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 FAM216BQ8N7L0 139 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 OSR1Q8TAX0 266 aaPredicted RBP12.14□□□□□ -0.47
UBXN11-215ENST00000494942 TMEM106BQ9NUM4 274 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 LINC00312Q9Y6C7 94 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 IGKV1OR2-108A0A075B7D4 117 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 KIR2DL5BA0A0G2JN68 375 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 KIR2DL5BA0A0G2JPC4 375 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
UBXN11-215ENST00000494942 CRYBB3P26998 211 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 Q0VG73 95 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 TIGITQ495A1 244 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 KIR2DL5AQ8N109 375 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 CACNG8Q8WXS5 425 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 OSTCQ9NRP0 149 aa12.14□□□□□ -0.47
UBXN11-215ENST00000494942 POLR3KQ9Y2Y1 108 aaPredicted RBP12.14□□□□□ -0.47
UBXN11-215ENST00000494942 A0A1W2PRE2 83 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 OR7C2O60412 319 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 MMP23AO75900 390 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 MT-ND6P03923 174 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 SNRPCP09234 159 aaKnown RBP12.13□□□□□ -0.47
UBXN11-215ENST00000494942 NDUFB7P17568 137 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 WDR73Q6P4I2 378 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 ZNF833PQ6ZTB9 187 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 RNF2Q99496 336 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 MRPL32Q9BYC8 188 aaKnown RBP12.13□□□□□ -0.47
UBXN11-215ENST00000494942 GAL3ST2Q9H3Q3 398 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 TP53TG3Q9ULZ0 132 aa12.13□□□□□ -0.47
UBXN11-215ENST00000494942 SNURFLB1AK76 121 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 RNF224P0DH78 156 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 SAA1P0DJI8 122 aaPredicted RBP12.12□□□□□ -0.47
UBXN11-215ENST00000494942 RNASE2P10153 161 aaKnown RBP12.12□□□□□ -0.47
UBXN11-215ENST00000494942 IER3P46695 156 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 CD69Q07108 199 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 OR5I1Q13606 314 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 KRTCAP3Q53RY4 240 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 ZNF503Q96F45 646 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 RAI1Q7Z5J4 1906 aaPredicted RBP12.12□□□□□ -0.47
UBXN11-215ENST00000494942 NKX6-3A6NJ46 265 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 APOA2P02652 100 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 C8orf88P0DMB2 117 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 CX3CL1P78423 397 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 MEF2CQ06413 473 aaPredicted RBP12.12□□□□□ -0.47
UBXN11-215ENST00000494942 MOB3BQ86TA1 216 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 OR8I2Q8N0Y5 310 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 SLC25A33Q9BSK2 321 aa12.12□□□□□ -0.47
UBXN11-215ENST00000494942 ZNF705FA8MVS1 300 aaPredicted RBP12.11□□□□□ -0.47
UBXN11-215ENST00000494942 INS-IGF2F8WCM5 200 aa12.11□□□□□ -0.47
UBXN11-215ENST00000494942 ISLRO14498 428 aa12.11□□□□□ -0.47
UBXN11-215ENST00000494942 SERF1AO75920 110 aa12.11□□□□□ -0.47
UBXN11-215ENST00000494942 ZNF705DP0CH99 300 aaPredicted RBP12.11□□□□□ -0.47
UBXN11-215ENST00000494942 ZNF705BP0CI00 300 aaPredicted RBP12.11□□□□□ -0.47
UBXN11-215ENST00000494942 CD40P25942 277 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms