RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 PARD6GQ9BYG4 376 aaPredicted RBP2.09□□□□□ -2.07
SMC4-224ENST00000494612 TSGA10Q9BZW7 698 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 ABCG5Q9H222 651 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 C3orf18Q9UK00 162 aa2.09□□□□□ -2.07
SMC4-224ENST00000494612 RPL26L1Q9UNX3 145 aaKnown RBP2.09□□□□□ -2.07
SMC4-224ENST00000494612 CPAMD8Q8IZJ3 1885 aa2.09□□□□□ -2.08
SMC4-224ENST00000494612 CACNA1CQ13936 2221 aa2.09□□□□□ -2.08
SMC4-224ENST00000494612 POLEQ07864 2286 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 DOCK10Q96BY6 2186 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 RTTNQ86VV8 2226 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 IGHV1-45A0A0A0MS14 117 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 IGHV2-26A0A0B4J1V2 119 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 A0A0J9YY10 115 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 LEUTXA8MZ59 168 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 C8orf87E5RJ46 101 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 LRRN3E7EW58 273 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 ARL6IP5O75915 188 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 EPPINO95925 133 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 HLA-DQB2P05538 268 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 COX6A1P12074 109 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 GABRA1P14867 456 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 AGTR1P30556 359 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 FOXA1P55317 472 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 RAB2AP61019 212 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 C1DQ13901 141 aaKnown RBP2.08□□□□□ -2.08
SMC4-224ENST00000494612 CENPWQ5EE01 88 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 LPCAT4Q643R3 524 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 ELP2Q6IA86 826 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 GLYATQ6IB77 296 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 PHF13Q86YI8 300 aaPredicted RBP2.08□□□□□ -2.08
SMC4-224ENST00000494612 MUC15Q8N387 334 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 Q8N402 240 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 OR52E4Q8NGH9 312 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 DTD1Q8TEA8 209 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 NAT14Q8WUY8 206 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 RNF133Q8WVZ7 376 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 PSMF1Q92530 271 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 PPCDCQ96CD2 204 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 DCUN1D1Q96GG9 259 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 PACRGQ96M98 296 aaPredicted RBP2.08□□□□□ -2.08
SMC4-224ENST00000494612 PRSS27Q9BQR3 290 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 TSSK6Q9BXA6 273 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 CDCA4Q9BXL8 241 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 EBPLQ9BY08 206 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 MRPS26Q9BYN8 205 aaKnown RBP2.08□□□□□ -2.08
SMC4-224ENST00000494612 CHST5Q9GZS9 411 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 TBL2Q9Y4P3 447 aaKnown RBP2.08□□□□□ -2.08
SMC4-224ENST00000494612 SPG11Q96JI7 2443 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 MTORP42345 2549 aa2.08□□□□□ -2.08
SMC4-224ENST00000494612 CHD3Q12873 2000 aaKnown RBP2.07□□□□□ -2.08
SMC4-224ENST00000494612 IGHV3-21A0A0B4J1V1 117 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 IGHV3-43A0A0B4J1X8 118 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 GGTLC3B5MD39 225 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 KCNK1O00180 336 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 MFSD11O43934 449 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 CPSF4O95639 269 aaKnown RBP2.07□□□□□ -2.08
SMC4-224ENST00000494612 CGB3P0DN86 165 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 CGB7P0DN87 165 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 SPTBP11277 2137 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 NEFHP12036 1026 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 UCHL3P15374 230 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 NQO1P15559 274 aaKnown RBP2.07□□□□□ -2.08
SMC4-224ENST00000494612 ZNF708P17019 499 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 MIPP30301 263 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 GABRA4P48169 554 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 MP68P56378 58 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 GLT6D1Q7Z4J2 308 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 FAM19A3Q7Z5A8 133 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 MTERF4Q7Z6M4 381 aaKnown RBP2.07□□□□□ -2.08
SMC4-224ENST00000494612 CPNE9Q8IYJ1 553 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 RPRMLQ8N4K4 120 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 ZIC4Q8N9L1 334 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 OR8A1Q8NGG7 326 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 CMTM2Q8TAZ6 248 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 PIGXQ8TBF5 258 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 TESCQ96BS2 214 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 SLC25A44Q96H78 314 aaPredicted RBP2.07□□□□□ -2.08
SMC4-224ENST00000494612 OLFM3Q96PB7 478 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 SELENOSQ9BQE4 189 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 SLC22A4Q9H015 551 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 MS4A6AQ9H2W1 248 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 PARVAQ9NVD7 372 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 C14orf105Q9NVL8 296 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 GLS2Q9UI32 602 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 TP53TG1Q9Y2A0 90 aa2.07□□□□□ -2.08
SMC4-224ENST00000494612 MAP1AP78559 2803 aaPredicted RBP2.06□□□□□ -2.08
SMC4-224ENST00000494612 EEF1E1-BLOC1S5C9J1V9 151 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 GOLGA6L19H0YKK7 550 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 EEF1E1O43324 174 aaKnown RBP2.06□□□□□ -2.08
SMC4-224ENST00000494612 TCF21O43680 179 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 SYNGR2O43760 224 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 ATP5HO75947 161 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 IFNA5P01569 189 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 IGHV3-53P01767 116 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 CFL1P23528 166 aaKnown RBP2.06□□□□□ -2.08
SMC4-224ENST00000494612 CEBPGP53567 150 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 PLGLB1Q02325 96 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 SKP2Q13309 424 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 PPP1R1AQ13522 171 aa2.06□□□□□ -2.08
SMC4-224ENST00000494612 PAFAH1B3Q15102 231 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms