RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 ST8SIA3O43173 380 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 LINC00205P59089 165 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 CX3CL1P78423 397 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 TAGLNQ01995 201 aaKnown RBP10.27□□□□□ -0.76
ERCC3-209ENST00000494464 FHL3Q13643 280 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 PSG5Q15238 335 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 DEFB136Q30KP8 78 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 SLC7A5P1Q8MH63 180 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 MRAPQ8TCY5 172 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 DPF1Q92782 380 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 C5orf30Q96GV9 206 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 GPHA2Q96T91 129 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 SLC35D1Q9NTN3 355 aa10.27□□□□□ -0.76
ERCC3-209ENST00000494464 METTL1Q9UBP6 276 aaKnown RBP10.27□□□□□ -0.76
ERCC3-209ENST00000494464 A0A1B0GU03 582 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 LINC00862A6NCI5 91 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 MSGN1A6NI15 193 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 TAAR5O14804 337 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 SCGB1D2O95969 90 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 NKX2-1P43699 371 aaPredicted RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 P2RY1P47900 373 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 RUNX1Q01196 453 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 KIAA0141Q14154 515 aaPredicted RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 ECSCRQ19T08 205 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 ZNF585BQ52M93 769 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 ZNF562Q6V9R5 426 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 ZNF491Q8N8L2 437 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 FLYWCH2Q96CP2 140 aaKnown RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 DUX3Q96PT4 197 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 HSD17B10Q99714 261 aaKnown RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 KLK15Q9H2R5 256 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 C11orf1Q9H5F2 150 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 FOXA2Q9Y261 457 aaPredicted RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 LSM5Q9Y4Y9 91 aaKnown RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 A0A1W2PN81 502 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 I3L521 148 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 FCN1O00602 326 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 SOX15O60248 233 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 PITX3O75364 302 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 ATG12O94817 140 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 CA2P00918 260 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 IGKV1-39P01597 117 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 IGKV1D-39P04432 117 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 EGR2P11161 476 aaPredicted RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 TPT1P13693 172 aaKnown RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 S100A1P23297 94 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 RPL12P30050 165 aaKnown RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 CHRNA7P36544 502 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 RAB14P61106 215 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 RPS16P62249 146 aaKnown RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 TMEM267Q0VDI3 215 aaPredicted RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 FAM219AQ8IW50 185 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 ADTRPQ96IZ2 230 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 ZNF471Q9BX82 626 aaPredicted RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 GNB4Q9HAV0 340 aa10.26□□□□□ -0.77
ERCC3-209ENST00000494464 RCL1Q9Y2P8 373 aaKnown RBP10.26□□□□□ -0.77
ERCC3-209ENST00000494464 SLC25A17O43808 307 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 IGLV2-23P01705 113 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 RRASP10301 218 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 PVALBP20472 110 aaPredicted RBP10.25□□□□□ -0.77
ERCC3-209ENST00000494464 DUTP33316 252 aaKnown RBP10.25□□□□□ -0.77
ERCC3-209ENST00000494464 LGALS7P47929 136 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 RAB9AP51151 201 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 KRTAP10-11P60412 298 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 EIF5AP63241 154 aaKnown RBP10.25□□□□□ -0.77
ERCC3-209ENST00000494464 ID3Q02535 119 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 RTL8BQ17RB0 113 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 AKIRIN2Q53H80 203 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 TMEM177Q53S58 311 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 PPP1R27Q86WC6 154 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 DMBX1Q8NFW5 382 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 CD300LFQ8TDQ1 290 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 ABHD5Q8WTS1 349 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 DDB2Q92466 427 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 ARPC1AQ92747 370 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 GPR146Q96CH1 333 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 HARBI1Q96MB7 349 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 CYTL1Q9NRR1 136 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 TPSG1Q9NRR2 321 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 COA4Q9NYJ1 87 aa10.25□□□□□ -0.77
ERCC3-209ENST00000494464 A0A0G2JRQ6 117 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 IGKV1-5P01602 117 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 CRYGBP07316 175 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 OR8U8P0C7N1 319 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 P0C879 139 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 HOXD3P31249 432 aaPredicted RBP10.24□□□□□ -0.77
ERCC3-209ENST00000494464 AKR1C2P52895 323 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 RPL30P62888 115 aaKnown RBP10.24□□□□□ -0.77
ERCC3-209ENST00000494464 ALKAL2Q6UX46 152 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 OR11H1Q8NG94 326 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 RNASE11Q8TAA1 199 aaKnown RBP10.24□□□□□ -0.77
ERCC3-209ENST00000494464 TCTEX1D2Q8WW35 142 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 FAM210AQ96ND0 272 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 FAM103A1Q9BTL3 118 aaKnown RBP10.24□□□□□ -0.77
ERCC3-209ENST00000494464 SLC25A32Q9H2D1 315 aa10.24□□□□□ -0.77
ERCC3-209ENST00000494464 ZMAT5Q9UDW3 170 aaKnown RBP10.24□□□□□ -0.77
ERCC3-209ENST00000494464 FAM90A26D6RGX4 464 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 K7EIL1 84 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 SHOXO15266 292 aa10.23□□□□□ -0.77
ERCC3-209ENST00000494464 RBFOX2O43251 390 aaKnown RBP eCLIP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms