RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 TPSG1Q9NRR2 321 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 NUP50Q9UKX7 468 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 RFNGQ9Y644 331 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 APCP25054 2843 aa5.41□□□□□ -1.54
MSH5-217ENST00000494458 HELZ2Q9BYK8 2649 aaKnown RBP5.41□□□□□ -1.54
MSH5-217ENST00000494458 BTBD17A6NE02 478 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 J3QLI3 93 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 NBR2O15453 112 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 IFNA10P01566 189 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 SAA4P35542 130 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 CAMLGP49069 296 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 HOXA1P49639 335 aaPredicted RBP5.4□□□□□ -1.54
MSH5-217ENST00000494458 FHITP49789 147 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 LGALS4P56470 323 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 ERHP84090 104 aaKnown RBP5.4□□□□□ -1.54
MSH5-217ENST00000494458 RUNX1Q01196 453 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 CD69Q07108 199 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 SSX2Q16385 188 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 C5orf64Q2M2E5 130 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 SPINK9Q5DT21 86 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 KLF17Q5JT82 389 aaPredicted RBP5.4□□□□□ -1.54
MSH5-217ENST00000494458 C10orf91Q5T1B1 145 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 OR8G2PQ6IF36 304 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 TMEM144Q7Z5S9 345 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 Q8N3U1 123 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 LINC01356Q8N9X3 169 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 OR10W1Q8NGF6 305 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 OR1P1Q8NH06 330 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 SCGB1C1Q8TD33 95 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 FAM210AQ96ND0 272 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 CLCC1Q96S66 551 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 P2RX4Q99571 388 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 NPCDR1Q9BY65 106 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 SMDT1Q9H4I9 107 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 RPRMQ9NS64 109 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 METTL1Q9UBP6 276 aaKnown RBP5.4□□□□□ -1.54
MSH5-217ENST00000494458 PFDN2Q9UHV9 154 aa5.4□□□□□ -1.54
MSH5-217ENST00000494458 IGKV1OR2-108A0A075B7D4 117 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 NBPF19A0A087WUL8 3843 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 SEC14L6B5MCN3 397 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 KRBOX1C9JBD0 128 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 TEX46H3BTG2 121 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 IGKV1D-33P01593 117 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 IGKV1-33P01594 117 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 HLA-DRB1P01911 266 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 MBP02144 154 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 FAM106CPP0CH98 169 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 EGR2P11161 476 aaPredicted RBP5.39□□□□□ -1.55
MSH5-217ENST00000494458 CTRB1P17538 263 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 BRS3P32247 399 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 SNCAP37840 140 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 OPRK1P41145 380 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 RPL27AP46776 148 aaKnown RBP5.39□□□□□ -1.55
MSH5-217ENST00000494458 RPL29P47914 159 aaKnown RBP5.39□□□□□ -1.55
MSH5-217ENST00000494458 CRIP2P52943 208 aaPredicted RBP5.39□□□□□ -1.55
MSH5-217ENST00000494458 MFAP2P55001 183 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 GAMTQ14353 236 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 ZNF726P1Q15940 193 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 C10orf55Q5SWW7 151 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 CTRB2Q6GPI1 263 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 Q6ZRG5 221 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 C9orf139Q6ZV77 190 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 MRPL41Q8IXM3 137 aaKnown RBP5.39□□□□□ -1.55
MSH5-217ENST00000494458 LILRB2Q8N423 598 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 RPP25LQ8N5L8 163 aaKnown RBP5.39□□□□□ -1.55
MSH5-217ENST00000494458 Q8N9W7 124 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 THAP8Q8NA92 274 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 TMEM116Q8NCL8 245 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 SRSF12Q8WXF0 261 aaKnown RBP5.39□□□□□ -1.55
MSH5-217ENST00000494458 MGST2Q99735 147 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 RSG1Q9BU20 258 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 FBXL15Q9H469 300 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 PRDM13Q9H4Q3 707 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 FNDC4Q9H6D8 234 aaPredicted RBP5.39□□□□□ -1.55
MSH5-217ENST00000494458 ZFAND3Q9H8U3 227 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 ENY2Q9NPA8 101 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 SLC45A2Q9UMX9 530 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 HILPDAQ9Y5L2 63 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 DMRT1Q9Y5R6 373 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 CENPEQ02224 2701 aa5.39□□□□□ -1.55
MSH5-217ENST00000494458 A0A1W2PRD5 423 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 A0A1W2PRF3 423 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 A0A1W2PRM7 423 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 PSMB11A5LHX3 300 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 NPIPB5A8MRT5 1133 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 TSPAN9O75954 239 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 YIF1AO95070 293 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 BRI3O95415 125 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 IFNA4P05014 189 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 LINC00869P0C866 280 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 OR13C7P0DN81 318 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 SUB1P53999 127 aaKnown RBP eCLIP5.38□□□□□ -1.55
MSH5-217ENST00000494458 CX3CL1P78423 397 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 TMEM41BQ5BJD5 291 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 C19orf54Q5BKX5 351 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 TOR2AQ5JU69 321 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 AKR1C8PQ5T2L2 129 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 ASPHD1Q5U4P2 390 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 ACSM6Q6P461 480 aa5.38□□□□□ -1.55
MSH5-217ENST00000494458 TEPPQ6URK8 271 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms