RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SNAPC5O75971 98 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 TPPPO94811 219 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 CD3DP04234 171 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 FGF2P09038 288 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 LYL1P12980 280 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 FAM106AQ4KMX7 169 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 ZNF57Q68EA5 555 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-219ENST00000494069 PLET1Q6UQ28 207 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 BTNL8Q6UX41 500 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 OR4D10Q8NGI6 311 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 SCARB1Q8WTV0 552 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 LSM10Q969L4 123 aaKnown RBP6.4□□□□□ -1.38
LRCH3-219ENST00000494069 MRGPRFQ96AM1 343 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 ZNF414Q96IQ9 312 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 SEC22AQ96IW7 307 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 SPATA25Q9BR10 227 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 CHRDL1Q9BU40 450 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 ZNF436Q9C0F3 470 aaPredicted RBP6.4□□□□□ -1.38
LRCH3-219ENST00000494069 MIXL1Q9H2W2 232 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 HIPK2Q9H2X6 1198 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 SRD5A3Q9H8P0 318 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 SLC2A8Q9NY64 477 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 TECRQ9NZ01 308 aaKnown RBP6.4□□□□□ -1.38
LRCH3-219ENST00000494069 EXTL2Q9UBQ6 330 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 F11RQ9Y624 299 aaKnown RBP6.4□□□□□ -1.38
LRCH3-219ENST00000494069 CEPT1Q9Y6K0 416 aa6.4□□□□□ -1.38
LRCH3-219ENST00000494069 EPPK1P58107 5090 aaKnown RBP6.4□□□□□ -1.39
LRCH3-219ENST00000494069 C15orf61A6NNL5 157 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 A8MWP6 167 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 CTDSP2O14595 271 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 TGOLN2O43493 480 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 ZNF207O43670 478 aaKnown RBP6.39□□□□□ -1.39
LRCH3-219ENST00000494069 IGHV3-48P01763 117 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 C8orf88P0DMB2 117 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 ZNF182P17025 639 aaPredicted RBP6.39□□□□□ -1.39
LRCH3-219ENST00000494069 ADMP35318 185 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 ALDH3B2P48448 385 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 UCP3P55916 312 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 SPCS2Q15005 226 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 SPINK9Q5DT21 86 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 THOC7Q6I9Y2 204 aaKnown RBP6.39□□□□□ -1.39
LRCH3-219ENST00000494069 LPCAT3Q6P1A2 487 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 MZT2AQ6P582 158 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 LHFPL1Q86WI0 220 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 LAX1Q8IWV1 398 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 SLC38A6Q8IZM9 456 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 CADM3Q8N126 398 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 UBAC2Q8NBM4 344 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 VN1R17PQ8TDU5 208 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 TP53RKQ96S44 253 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 LYSTQ99698 3801 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 TMEM14BQ9NUH8 114 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 THYN1Q9P016 225 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 PRNDQ9UKY0 176 aa6.39□□□□□ -1.39
LRCH3-219ENST00000494069 IGKV1-5P01602 117 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 PGAM2P15259 253 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 PPP5CP53041 499 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 SP6Q3SY56 376 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 RNASE10Q5GAN6 216 aaKnown RBP6.38□□□□□ -1.39
LRCH3-219ENST00000494069 FAAP20Q6NZ36 180 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 H2BFWTQ7Z2G1 175 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 OR2C3Q8N628 320 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 OR52B4Q8NGK2 314 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 OR5B3Q8NH48 314 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 TMEM190Q8WZ59 177 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 AP3S1Q92572 193 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 MISP3Q96FF7 219 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 C20orf24Q9BUV8 137 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 C21orf62Q9NYP8 219 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 MTFP1Q9UDX5 166 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 UFC1Q9Y3C8 167 aa6.38□□□□□ -1.39
LRCH3-219ENST00000494069 IGHV3-49A0A0A0MS15 119 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 A0A0B4J293 547 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 I3L2K1 104 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 IFNA6P05013 189 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 CTSGP08311 255 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 S100GP29377 79 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 PIGPP57054 158 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 RND3P61587 244 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 Q56UQ5 140 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 HSD17B13Q7Z5P4 300 aaPredicted RBP6.37□□□□□ -1.39
LRCH3-219ENST00000494069 OR1P1Q8NH06 330 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 OR4A16Q8NH70 328 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 MARC2Q969Z3 335 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 ISOC1Q96CN7 298 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 BSCL2Q96G97 398 aaPredicted RBP6.37□□□□□ -1.39
LRCH3-219ENST00000494069 TMEM56Q96MV1 263 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 TSC22D3Q99576 134 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 MRPS26Q9BYN8 205 aaKnown RBP6.37□□□□□ -1.39
LRCH3-219ENST00000494069 PALMDQ9NP74 551 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 FAM212BQ9NTI7 297 aaPredicted RBP6.37□□□□□ -1.39
LRCH3-219ENST00000494069 FKBP11Q9NYL4 201 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 MRPL27Q9P0M9 148 aaKnown RBP6.37□□□□□ -1.39
LRCH3-219ENST00000494069 UBQLN2Q9UHD9 624 aa6.37□□□□□ -1.39
LRCH3-219ENST00000494069 A0A0G2JRQ6 117 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 NDUFA4O00483 81 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 RGS5O15539 181 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 CYB5BO43169 146 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 MT-CO2P00403 227 aa6.36□□□□□ -1.39
LRCH3-219ENST00000494069 CD74P04233 296 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms