RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 U3KQ87 197 aa9□□□□□ -0.97
MCF2L-231ENST00000494043 PLXNB1O43157 2135 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 LINC01548A6NM66 108 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 C15orf62A8K5M9 175 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 IFNA10P01566 189 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 REG1AP05451 166 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 HKR1P10072 659 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 NPY1RP25929 384 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 SNCAP37840 140 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 EIF2B2P49770 351 aaKnown RBP8.99□□□□□ -0.97
MCF2L-231ENST00000494043 CRIP2P52943 208 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-231ENST00000494043 EWSR1Q01844 656 aaKnown RBP eCLIP8.99□□□□□ -0.97
MCF2L-231ENST00000494043 TMEM267Q0VDI3 215 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-231ENST00000494043 ASPHD1Q5U4P2 390 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 TMEM14EPQ6UXP3 125 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 Q6ZS46 218 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 ACOT7LQ6ZUV0 252 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 SLC35E3Q7Z769 313 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 TMEM252Q8N6L7 170 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 ZNF114Q8NC26 417 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 SGMS2Q8NHU3 365 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 TMEM170AQ8WVE7 144 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 JMJD8Q96S16 334 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 MFFQ9GZY8 342 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 SLC25A31Q9H0C2 315 aa8.99□□□□□ -0.97
MCF2L-231ENST00000494043 NPIPB5A8MRT5 1133 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 TRIM77I1YAP6 450 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 IGF1P05019 195 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 RNASE1P07998 156 aaKnown RBP8.98□□□□□ -0.97
MCF2L-231ENST00000494043 OR8U8P0C7N1 319 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 METTL15P1P0C7V9 234 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 RNASE2P10153 161 aaKnown RBP8.98□□□□□ -0.97
MCF2L-231ENST00000494043 CTRB1P17538 263 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 CXCL2P19875 107 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 SULT1A1P50225 295 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 ATP5IP56385 69 aaPredicted RBP8.98□□□□□ -0.97
MCF2L-231ENST00000494043 UBA52P62987 128 aaKnown RBP8.98□□□□□ -0.97
MCF2L-231ENST00000494043 BAXQ07812 192 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 OR2F1Q13607 317 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 ZNF345Q14585 488 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 C2orf83Q53S99 150 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 CTRB2Q6GPI1 263 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 STX12Q86Y82 276 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 C9orf62Q8N4C0 152 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 LFNGQ8NES3 379 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 TMEM68Q96MH6 324 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 P2RX4Q99571 388 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 PRSS22Q9GZN4 317 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 ZNF702PQ9H963 129 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 ZC4H2Q9NQZ6 224 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 ZNF580Q9UK33 172 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 PAIP2BQ9ULR5 123 aaKnown RBP8.98□□□□□ -0.97
MCF2L-231ENST00000494043 HSPB11Q9Y547 144 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 ZFHX3Q15911 3703 aa8.98□□□□□ -0.97
MCF2L-231ENST00000494043 FAM181BA6NEQ2 426 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 AP4M1O00189 453 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 FBXO24O75426 580 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 CST7O76096 145 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 SCAF4O95104 1147 aaKnown RBP8.97□□□□□ -0.97
MCF2L-231ENST00000494043 CRYGCP07315 174 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 AP2S1P53680 142 aaPredicted RBP8.97□□□□□ -0.97
MCF2L-231ENST00000494043 SUB1P53999 127 aaKnown RBP eCLIP8.97□□□□□ -0.97
MCF2L-231ENST00000494043 RPL15P61313 204 aaKnown RBP8.97□□□□□ -0.97
MCF2L-231ENST00000494043 RAB11AP62491 216 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 ECSCRQ19T08 205 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 LGALSLQ3ZCW2 172 aaPredicted RBP8.97□□□□□ -0.97
MCF2L-231ENST00000494043 C19orf54Q5BKX5 351 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 LAMTOR1Q6IAA8 161 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 UNQ5815/PRO19632Q6UWF5 114 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 C19orf35Q6ZS72 473 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 Q8N2B8 174 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 KCNRGQ8N5I3 272 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 TTC9CQ8N5M4 171 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 OR1P1Q8NH06 330 aa8.97□□□□□ -0.97
MCF2L-231ENST00000494043 FAM110DQ8TAY7 271 aaPredicted RBP8.97□□□□□ -0.97
MCF2L-231ENST00000494043 F11RQ9Y624 299 aaKnown RBP8.97□□□□□ -0.97
MCF2L-231ENST00000494043 TRAV41A0A0B4J266 112 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 A0A0D9SG52 128 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 PMS2P5A8MQ11 134 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 G3V318 75 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 TCF21O43680 179 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 IFNA4P05014 189 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 NHLH2Q02577 135 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 ARL16Q0P5N6 197 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 TMEM95Q3KNT9 176 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 AKIRIN2Q53H80 203 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 PVRIGQ6DKI7 326 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 OR8G2PQ6IF36 304 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 ETV3LQ6ZN32 361 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 HAPLN4Q86UW8 402 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 STPG2Q8N412 459 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 TMEM217Q8N7C4 229 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 BSCL2Q96G97 398 aaPredicted RBP8.96□□□□□ -0.98
MCF2L-231ENST00000494043 WNT10AQ9GZT5 417 aa8.96□□□□□ -0.98
MCF2L-231ENST00000494043 NF1P21359 2839 aa8.95□□□□□ -0.98
MCF2L-231ENST00000494043 PRSS46E5RG02 174 aa8.95□□□□□ -0.98
MCF2L-231ENST00000494043 DEFA4P12838 97 aa8.95□□□□□ -0.98
MCF2L-231ENST00000494043 MFAP2P55001 183 aa8.95□□□□□ -0.98
MCF2L-231ENST00000494043 HBG1P69891 147 aa8.95□□□□□ -0.98
MCF2L-231ENST00000494043 HBG2P69892 147 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms