RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ZNF439Q8NDP4 499 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 PINX1Q96BK5 328 aaKnown RBP11.3□□□□□ -0.6
VCP-207ENST00000493886 TNCP24821 2201 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 hADV38S2A0JD32 116 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 E7EQL1 145 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 PAGE4O60829 102 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 MMP23AO75900 390 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 COL8A2P25067 703 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 RND2P52198 227 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 VKORC1L1Q8N0U8 176 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 OR10P1Q8NGE3 313 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 NEUROG1Q92886 237 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 RNASE6Q93091 150 aaKnown RBP11.3□□□□□ -0.6
VCP-207ENST00000493886 ZNF48Q96MX3 618 aaPredicted RBP11.3□□□□□ -0.6
VCP-207ENST00000493886 SLC25A10Q9UBX3 287 aaPredicted RBP11.3□□□□□ -0.6
VCP-207ENST00000493886 NAT8Q9UHE5 227 aa11.3□□□□□ -0.6
VCP-207ENST00000493886 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 GGCTO75223 188 aaKnown RBP11.29□□□□□ -0.6
VCP-207ENST00000493886 RPL23P62829 140 aaKnown RBP11.29□□□□□ -0.6
VCP-207ENST00000493886 TMEM241Q24JQ0 296 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 BSXQ3C1V8 233 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 OR4X1Q8NH49 305 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 OR4A16Q8NH70 328 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 OR4S2Q8NH73 311 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 TMEM147Q9BVK8 224 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 YLPM1P49750 1951 aaKnown RBP11.29□□□□□ -0.6
VCP-207ENST00000493886 POLEQ07864 2286 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 PKDREJQ9NTG1 2253 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 PPIAL4EA0A075B759 164 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 PPIAL4DF5H284 164 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 PPIAL4FP0DN26 164 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 PSMB3P49720 205 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 PRSS8Q16651 343 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 TMEM30BQ3MIR4 351 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 CCL17Q92583 94 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 TMEM204Q9BSN7 226 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 RPUSD1Q9UJJ7 312 aaKnown RBP11.29□□□□□ -0.6
VCP-207ENST00000493886 PPIAL4AQ9Y536 164 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 LINC00312Q9Y6C7 94 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 ARFGEF3Q5TH69 2177 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 TET2Q6N021 2002 aaPredicted RBP11.29□□□□□ -0.6
VCP-207ENST00000493886 LOC105371242A0A075B767 164 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 H7BYZ3 331 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
VCP-207ENST00000493886 THBS3P49746 956 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 P2RX4Q99571 388 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 HIST1H2BLQ99880 126 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 PCGF1Q9BSM1 259 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 NPCDR1Q9BY65 106 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 DYNLRB1Q9NP97 96 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 TMEM106BQ9NUM4 274 aa11.29□□□□□ -0.6
VCP-207ENST00000493886 KBTBD11O94819 623 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 GALR1P47211 349 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 OR13D1Q8NGV5 346 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 TMEM140Q9NV12 185 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 TIMM9Q9Y5J7 89 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 IGF2RP11717 2491 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 PGPEP1LA6NFU8 196 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 CA7P43166 264 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 ERVFC1-1P60608 527 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 RELBQ01201 579 aa11.28□□□□□ -0.6
VCP-207ENST00000493886 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
VCP-207ENST00000493886 TRAV3A0A0B4J244 114 aa11.27□□□□□ -0.6
VCP-207ENST00000493886 CTXND1A0A1B0GTU2 59 aa11.27□□□□□ -0.6
VCP-207ENST00000493886 C15orf62A8K5M9 175 aa11.27□□□□□ -0.6
VCP-207ENST00000493886 CHRNB4P30926 498 aa11.27□□□□□ -0.6
VCP-207ENST00000493886 GNB2P62879 340 aa11.27□□□□□ -0.6
VCP-207ENST00000493886 RPL31P62899 125 aaKnown RBP11.27□□□□□ -0.6
VCP-207ENST00000493886 MEF2CQ06413 473 aaPredicted RBP11.27□□□□□ -0.6
VCP-207ENST00000493886 TEX38Q6PEX7 206 aa11.27□□□□□ -0.6
VCP-207ENST00000493886 ZNF709Q8N972 641 aa11.27□□□□□ -0.6
VCP-207ENST00000493886 OR52E5Q8NH55 327 aa11.27□□□□□ -0.6
VCP-207ENST00000493886 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.6
VCP-207ENST00000493886 TRBV24-1A0A075B6N3 115 aa11.27□□□□□ -0.61
VCP-207ENST00000493886 FCN3O75636 299 aa11.27□□□□□ -0.61
VCP-207ENST00000493886 KLRB1Q12918 225 aa11.27□□□□□ -0.61
VCP-207ENST00000493886 LDLRAD2Q5SZI1 272 aa11.27□□□□□ -0.61
VCP-207ENST00000493886 SLC25A48Q6ZT89 311 aaKnown RBP11.27□□□□□ -0.61
VCP-207ENST00000493886 CENPVQ7Z7K6 275 aaPredicted RBP11.27□□□□□ -0.61
VCP-207ENST00000493886 TMEM37Q8WXS4 190 aa11.27□□□□□ -0.61
VCP-207ENST00000493886 ZNF479Q96JC4 524 aa11.27□□□□□ -0.61
VCP-207ENST00000493886 SPTA1P02549 2419 aa11.27□□□□□ -0.61
VCP-207ENST00000493886 ELOA3CA0A087WX78 387 aaPredicted RBP11.26□□□□□ -0.61
VCP-207ENST00000493886 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
VCP-207ENST00000493886 FAM90A27PA6NNH2 459 aa11.26□□□□□ -0.61
VCP-207ENST00000493886 CD3EP07766 207 aa11.26□□□□□ -0.61
VCP-207ENST00000493886 APOBEC3AP31941 199 aaPredicted RBP11.26□□□□□ -0.61
VCP-207ENST00000493886 CST9LP1Q5W188 147 aa11.26□□□□□ -0.61
VCP-207ENST00000493886 OR5B12Q96R08 314 aa11.26□□□□□ -0.61
VCP-207ENST00000493886 DERL1Q9BUN8 251 aa11.26□□□□□ -0.61
VCP-207ENST00000493886 MS4A5Q9H3V2 200 aa11.26□□□□□ -0.61
VCP-207ENST00000493886 PATZ1Q9HBE1 687 aaKnown RBP11.26□□□□□ -0.61
VCP-207ENST00000493886 TMEM242Q9NWH2 141 aa11.26□□□□□ -0.61
VCP-207ENST00000493886 VWC2Q2TAL6 325 aa11.26□□□□□ -0.61
VCP-207ENST00000493886 LINC01560Q8TB33 94 aa11.26□□□□□ -0.61
VCP-207ENST00000493886 ZCCHC14Q8WYQ9 949 aaKnown RBP11.26□□□□□ -0.61
VCP-207ENST00000493886 PPP5D1E7EU14 171 aa11.25□□□□□ -0.61
VCP-207ENST00000493886 PFN1P07737 140 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms