RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	OR6F1	Q8NGZ6	308 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	CACNG8	Q8WXS5	425 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	MARC2	Q969Z3	335 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	SLC25A38	Q96DW6	304 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	FAM110A	Q9BQ89	295 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	SRSF8	Q9BRL6	282 aa	Known RBP	5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	QTRT1	Q9BXR0	403 aa	Known RBP	5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	RETN	Q9HD89	108 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	TMEM140	Q9NV12	185 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	MRPL27	Q9P0M9	148 aa	Known RBP	5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	UFC1	Q9Y3C8	167 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	IGLV11-55	A0A075B6I3	123 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	TRAV3	A0A0B4J244	114 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	TRAV25	A0A0B4J276	109 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	IGHV3-35	A0A0C4DH35	117 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853		A0A1B0GW64	132 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	RBMY1B	A6NDE4	496 aa	Known RBP	5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	RBMY1E	A6NEQ0	496 aa	Known RBP	5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	MFSD2B	A6NFX1	497 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	MARCH11	A6NNE9	402 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	S1PR2	O95136	353 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	KRAS	P01116	189 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	PMP2	P02689	132 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	RLN1	P04808	185 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	RBMY1D	P0C7P1	496 aa	Known RBP	5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	F2R	P25116	425 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	PTBP1	P26599	531 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	PRSS3	P35030	304 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	LPAR6	P43657	344 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	TAS2R46	P59540	309 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	TSPAN5	P62079	268 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	POU2AF1	Q16633	256 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	UBE2NL	Q5JXB2	153 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	TMEM69	Q5SWH9	247 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	THOC7	Q6I9Y2	204 aa	Known RBP	5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	DHRS11	Q6UWP2	260 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	BTNL8	Q6UX41	500 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	LINC00322	Q6ZN03	302 aa	Predicted RBP	5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	TMEM61	Q8N0U2	210 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	SAMD12	Q8N8I0	201 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	OR10W1	Q8NGF6	305 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	OR1L6	Q8NGR2	347 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	VN1R17P	Q8TDU5	208 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	TMEM56	Q96MV1	263 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	WFDC10A	Q9H1F0	79 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	FKBP11	Q9NYL4	201 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	COMMD9	Q9P000	198 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	MLX	Q9UH92	298 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	DMRT1	Q9Y5R6	373 aa		5.66	□□□□□ -1.5
RBM39-238	ENST00000493853	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	TEX50	A0A1B0GTY4	177 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	IGLC7	A0M8Q6	106 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	TMEM213	A2RRL7	107 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	OR2T8	A6NH00	312 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853		A8MWP6	167 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	TGOLN2	O43493	480 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	PGLYRP1	O75594	196 aa	Predicted RBP	5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	SERPINE2	P07093	398 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	EDN2	P20800	178 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	GNRHR	P30968	328 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	ELL	P55199	621 aa	Predicted RBP	5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	LSM3	P62310	102 aa	Known RBP	5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	KLK9	Q2XQG4	91 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	KCTD21	Q4G0X4	260 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	LPCAT3	Q6P1A2	487 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	OR2C3	Q8N628	320 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	GDPD1	Q8N9F7	314 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	UBAC2	Q8NBM4	344 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	ZNF502	Q8TBZ5	544 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	DGCR14	Q96DF8	476 aa	Known RBP	5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	TSC22D3	Q99576	134 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	C20orf24	Q9BUV8	137 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	GGTLC1	Q9BX51	225 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	C11orf21	Q9P2W6	132 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	KLK9	Q9UKQ9	250 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853	OR51B2	Q9Y5P1	312 aa		5.65	□□□□□ -1.5
RBM39-238	ENST00000493853		A0A087WXM4	84 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	IGHV3-21	A0A0B4J1V1	117 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	CGB1	A6NKQ9	187 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	GPR31	O00270	319 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	FGF2	P09038	288 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	HLA-DMA	P28067	261 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	G6PC	P35575	357 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	APOC4	P55056	127 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	TAS2R20	P59543	309 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	ODF1	Q14990	250 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853		Q56UQ5	140 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	SPSB3	Q6PJ21	355 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	UNQ9165/PRO28630	Q6UXU0	137 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	OR4A16	Q8NH70	328 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	FCAMR	Q8WWV6	532 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	LSM10	Q969L4	123 aa	Known RBP	5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	MOB3A	Q96BX8	217 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	BSCL2	Q96G97	398 aa	Predicted RBP	5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	DAZ1	Q9NQZ3	744 aa	Known RBP	5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	NDUFA4L2	Q9NRX3	87 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	C21orf62	Q9NYP8	219 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	COMMD3	Q9UBI1	195 aa		5.64	□□□□□ -1.51
RBM39-238	ENST00000493853	PRND	Q9UKY0	176 aa		5.64	□□□□□ -1.51

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