RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 Q8N9W7 124 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 ZBTB8BQ8NAP8 495 aaPredicted RBP9.56□□□□□ -0.88
UPF3A-210ENST00000493727 TMEM167AQ8TBQ9 72 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 OR10C1Q96KK4 312 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 C2orf50Q96LR7 162 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 ZNF430Q9H8G1 570 aaPredicted RBP9.56□□□□□ -0.88
UPF3A-210ENST00000493727 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.56□□□□□ -0.88
UPF3A-210ENST00000493727 FKBP11Q9NYL4 201 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 OR51B2Q9Y5P1 312 aa9.56□□□□□ -0.88
UPF3A-210ENST00000493727 IFNA17P01571 189 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 CRYGBP07316 175 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 SLC25A6P12236 298 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 BCAP31P51572 246 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 S100A10P60903 97 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 FOXRED2Q8IWF2 684 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 FAM71E2Q8N5Q1 922 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 OR11H7Q8NGC8 314 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 HINT2Q9BX68 163 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 QTRT1Q9BXR0 403 aaKnown RBP9.55□□□□□ -0.88
UPF3A-210ENST00000493727 PLSCR3Q9NRY6 295 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 SERTAD4Q9NUC0 356 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 COA4Q9NYJ1 87 aa9.55□□□□□ -0.88
UPF3A-210ENST00000493727 FOXA2Q9Y261 457 aaPredicted RBP9.55□□□□□ -0.88
UPF3A-210ENST00000493727 TMA7Q9Y2S6 64 aaKnown RBP9.55□□□□□ -0.88
UPF3A-210ENST00000493727 SH2D7A6NKC9 451 aaPredicted RBP9.54□□□□□ -0.88
UPF3A-210ENST00000493727 WRBO00258 174 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 ST8SIA3O43173 380 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 HLA-DRB1P01911 266 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 TRAPPC2P0DI81 140 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 TRAPPC2BP0DI82 140 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 CXCL3P19876 107 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 MAS1LP35410 378 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 RPL27AP46776 148 aaKnown RBP9.54□□□□□ -0.88
UPF3A-210ENST00000493727 HOXA1P49639 335 aaPredicted RBP9.54□□□□□ -0.88
UPF3A-210ENST00000493727 CYCSP99999 105 aaKnown RBP9.54□□□□□ -0.88
UPF3A-210ENST00000493727 CD83Q01151 205 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 PJVKQ0ZLH3 352 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 NSUN5P1Q3KNT7 163 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 Q6ZRM9 215 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 GRPEL2Q8TAA5 225 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 FYTTD1Q96QD9 318 aaKnown RBP9.54□□□□□ -0.88
UPF3A-210ENST00000493727 ZNF436Q9C0F3 470 aaPredicted RBP9.54□□□□□ -0.88
UPF3A-210ENST00000493727 ENY2Q9NPA8 101 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 CACFD1Q9UGQ2 172 aa9.54□□□□□ -0.88
UPF3A-210ENST00000493727 CEBPZOSA8MTT3 80 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 FCN1O00602 326 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 IL6RP08887 468 aaPredicted RBP9.53□□□□□ -0.88
UPF3A-210ENST00000493727 FGF2P09038 288 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 GIPP09681 153 aaPredicted RBP9.53□□□□□ -0.88
UPF3A-210ENST00000493727 MYOD1P15172 320 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 HOXA5P20719 270 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 NKX2-1P43699 371 aaPredicted RBP9.53□□□□□ -0.88
UPF3A-210ENST00000493727 VDAC2P45880 294 aaPredicted RBP9.53□□□□□ -0.88
UPF3A-210ENST00000493727 H2BFSP57053 126 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 FXYD3Q14802 87 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 SPINK9Q5DT21 86 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 C10orf55Q5SWW7 151 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 AKAP14Q86UN6 197 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 STPG3Q8N7X2 389 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 OR1L8Q8NGR8 309 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 ASB13Q8WXK3 278 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 ARPC1AQ92747 370 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 NMES1Q9C002 83 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 PLEKHA3Q9HB20 300 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 PARP11Q9NR21 331 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 TMEM14BQ9NUH8 114 aa9.53□□□□□ -0.88
UPF3A-210ENST00000493727 LSM5Q9Y4Y9 91 aaKnown RBP9.53□□□□□ -0.88
UPF3A-210ENST00000493727 TEX50A0A1B0GTY4 177 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 FAM90A26D6RGX4 464 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 PITX3O75364 302 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 MED6O75586 246 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 CCNKO75909 580 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 CD28P10747 220 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 SPCS3P61009 180 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 HSPE1P61604 102 aaKnown RBP9.52□□□□□ -0.89
UPF3A-210ENST00000493727 CX3CL1P78423 397 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 TNFRSF9Q07011 255 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 LRRC37A5PQ49AS3 106 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 CXorf66Q5JRM2 361 aaPredicted RBP9.52□□□□□ -0.89
UPF3A-210ENST00000493727 SLC35E3Q7Z769 313 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 ZNF429Q86V71 674 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 OR4D5Q8NGN0 318 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 OR5B3Q8NH48 314 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 MRAPQ8TCY5 172 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 WIPF2Q8TF74 440 aaPredicted RBP9.52□□□□□ -0.89
UPF3A-210ENST00000493727 SRSF12Q8WXF0 261 aaKnown RBP9.52□□□□□ -0.89
UPF3A-210ENST00000493727 C20orf173Q96LM9 149 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 HSPB9Q9BQS6 159 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 MAGT1Q9H0U3 335 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 ZFP57Q9NU63 452 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 ZNF257Q9Y2Q1 563 aa9.52□□□□□ -0.89
UPF3A-210ENST00000493727 IGHV7-81A0A0B4J1V7 117 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 A0A1W2PN81 502 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 L7N2F9 121 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 SSSCA1O60232 199 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 PET100P0DJ07 73 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 CHRNA7P36544 502 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 RAP2BP61225 183 aa9.51□□□□□ -0.89
UPF3A-210ENST00000493727 POLR2GP62487 172 aaKnown RBP eCLIP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 207.3 ms